Literature DB >> 16302237

Crystal structure of ADP/AMP complex of Escherichia coli adenylate kinase.

Michael B Berry1, Euiyoung Bae, Tim R Bilderback, Michael Glaser, George N Phillips.   

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Year:  2006        PMID: 16302237     DOI: 10.1002/prot.20699

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


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  15 in total

1.  On the roles of substrate binding and hinge unfolding in conformational changes of adenylate kinase.

Authors:  Jason B Brokaw; Jhih-Wei Chu
Journal:  Biophys J       Date:  2010-11-17       Impact factor: 4.033

2.  Illuminating the mechanistic roles of enzyme conformational dynamics.

Authors:  Jeffrey A Hanson; Karl Duderstadt; Lucas P Watkins; Sucharita Bhattacharyya; Jason Brokaw; Jhih-Wei Chu; Haw Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-07       Impact factor: 11.205

3.  Conformational transition pathways explored by Monte Carlo simulation integrated with collective modes.

Authors:  Nigar Kantarci-Carsibasi; Turkan Haliloglu; Pemra Doruker
Journal:  Biophys J       Date:  2008-08-01       Impact factor: 4.033

4.  Zipping and unzipping of adenylate kinase: atomistic insights into the ensemble of open<-->closed transitions.

Authors:  Oliver Beckstein; Elizabeth J Denning; Juan R Perilla; Thomas B Woolf
Journal:  J Mol Biol       Date:  2009-09-12       Impact factor: 5.469

5.  Event detection and sub-state discovery from biomolecular simulations using higher-order statistics: application to enzyme adenylate kinase.

Authors:  Arvind Ramanathan; Andrej J Savol; Pratul K Agarwal; Chakra S Chennubhotla
Journal:  Proteins       Date:  2012-08-08

6.  The crystal structure of Mycobacterium tuberculosis adenylate kinase in complex with two molecules of ADP and Mg2+ supports an associative mechanism for phosphoryl transfer.

Authors:  Marco Bellinzoni; Ahmed Haouz; Martin Graña; Hélène Munier-Lehmann; William Shepard; Pedro M Alzari
Journal:  Protein Sci       Date:  2006-05-02       Impact factor: 6.725

7.  Elucidating the site of protein-ATP binding by top-down mass spectrometry.

Authors:  Sheng Yin; Joseph A Loo
Journal:  J Am Soc Mass Spectrom       Date:  2010-01-18       Impact factor: 3.109

8.  Mapping the Dynamics Landscape of Conformational Transitions in Enzyme: The Adenylate Kinase Case.

Authors:  Dechang Li; Ming S Liu; Baohua Ji
Journal:  Biophys J       Date:  2015-08-04       Impact factor: 4.033

Review 9.  Moving beyond static snapshots: Protein dynamics and the Protein Data Bank.

Authors:  Mitchell D Miller; George N Phillips
Journal:  J Biol Chem       Date:  2021-05-04       Impact factor: 5.157

10.  Probing the Transition State in Enzyme Catalysis by High-Pressure NMR Dynamics.

Authors:  John B Stiller; S Jordan Kerns; Marc Hoemberger; Young-Jin Cho; Renee Otten; Michael F Hagan; Dorothee Kern
Journal:  Nat Catal       Date:  2019-06-24
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