Literature DB >> 16291095

A call for likelihood phylogenetics even when the process of sequence evolution is heterogeneous.

Eric A Gaucher1, Michael M Miyamoto.   

Abstract

Mesh：

Year:  2005        PMID： 16291095     DOI： 10.1016/j.ympev.2005.03.027

Source DB:  PubMed          Journal:  Mol Phylogenet Evol        ISSN： 1055-7903            Impact factor:   4.286


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  16 in total

1.  Comprehensive gene and taxon coverage elucidates radiation patterns in moths and butterflies.

Authors:  Marko Mutanen; Niklas Wahlberg; Lauri Kaila
Journal:  Proc Biol Sci       Date:  2010-05-05       Impact factor: 5.349

2.  Automated removal of noisy data in phylogenomic analyses.

Authors:  Vadim V Goremykin; Svetlana V Nikiforova; Olaf R P Bininda-Emonds
Journal:  J Mol Evol       Date:  2010-10-26       Impact factor: 2.395

3.  Topological estimation biases with covarion evolution.

Authors:  Huai-Chun Wang; Edward Susko; Matthew Spencer; Andrew J Roger
Journal:  J Mol Evol       Date:  2007-12-14       Impact factor: 2.395

4.  Characterization and phylogenetic analysis of a cnidarian LMP X-like cDNA.

Authors:  Larry J Dishaw; Manuel L Herrera; Charles H Bigger
Journal:  Immunogenetics       Date:  2006-03-22       Impact factor: 2.846

5.  A mixed branch length model of heterotachy improves phylogenetic accuracy.

Authors:  Bryan Kolaczkowski; Joseph W Thornton
Journal:  Mol Biol Evol       Date:  2008-03-03       Impact factor: 16.240

Review 6.  Deep phylogeny--how a tree can help characterize early life on Earth.

Authors:  Eric A Gaucher; James T Kratzer; Ryan N Randall
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-01       Impact factor: 10.005

7.  Can quartet analyses combining maximum likelihood estimation and Hennigian logic overcome long branch attraction in phylogenomic sequence data?

Authors:  Patrick Kück; Mark Wilkinson; Christian Groß; Peter G Foster; Johann W Wägele
Journal:  PLoS One       Date:  2017-08-25       Impact factor: 3.240

8.  Species discrimination and phylogenetic inference of 17 Chinese Leishmania isolates based on internal transcribed spacer 1 (ITS1) sequences.

Authors:  Bin-Bin Yang; Xian-Guang Guo; Xiao-Su Hu; Jian-Guo Zhang; Lin Liao; Da-Li Chen; Jian-Ping Chen
Journal:  Parasitol Res       Date:  2010-07-09       Impact factor: 2.289

9.  Using shifts in amino acid frequency and substitution rate to identify latent structural characters in base-excision repair enzymes.

Authors:  Ramiro Barrantes-Reynolds; Susan S Wallace; Jeffrey P Bond
Journal:  PLoS One       Date:  2011-10-06       Impact factor: 3.240

10.  Interchanging functionality among homologous elongation factors using signatures of heterotachy.

Authors:  Ercan Cacan; James T Kratzer; Megan F Cole; Eric A Gaucher
Journal:  J Mol Evol       Date:  2013-01-31       Impact factor: 2.395
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