Literature DB >> 16289902

26-Locus Y-STR typing in a Bhutanese population sample.

Emma J Parkin1, Thirsa Kraayenbrink, George L van Driem, Karma Tshering Of Gaselô, Peter de Knijff, Mark A Jobling.   

Abstract

26 Y chromosome short tandem repeat (STR) loci were amplified in a sample of 856 unrelated males from Bhutan, using two multiplex polymerase chain reaction (PCR) assays. The first multiplex is the Y-STR 20plex described by Butler et al. [J.M. Butler, R. Schoske, P.M. Vallone, M.C. Kline, A.J. Redd, M.F. Hammer, A novel multiplex for simultaneous amplification of 20 Y chromosome STR markers, Forensic Sci. Int. 129 (2002) 10-24], and the second is a novel (but overlapping) 14plex that targets six additional Y-STRs (DYS425, DYS434, DYS435, DYS436, DYS461, DYS462) and also amplifies the amelogenin locus. The 26-loci give a discriminating power of 0.9957, though even at this resolution one haplotype occurs 24 times. We identify novel alleles at five loci and microvariants at a further three, which were characterised by sequencing. Extended (11-locus) haplotypes for these samples have been submitted to the Y-STR Haplotype Reference Database (YHRD).

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Year:  2005        PMID: 16289902     DOI: 10.1016/j.forsciint.2005.10.008

Source DB:  PubMed          Journal:  Forensic Sci Int        ISSN: 0379-0738            Impact factor:   2.395


  15 in total

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2.  Diversity of five novel Y-STR loci and their application in studies of north Chinese populations.

Authors:  Zhaoyang Xu; Haiming Sun; Yang Yu; Yan Jin; Xaingning Meng; Donglin Sun; Jing Bai; Feng Chen; Songbin Fu
Journal:  J Genet       Date:  2010-04       Impact factor: 1.166

3.  The validation study of a novel assay with 30 slow and moderate mutation Y-STR markers for criminal investigation and database applications.

Authors:  Yongsong Zhou; Tong Xie; Yuxin Guo; Xinglin Mei; Qiong Lan; Yating Fang; Xiaoye Jin; Bofeng Zhu
Journal:  Int J Legal Med       Date:  2019-03-26       Impact factor: 2.686

4.  Y-chromosome descent clusters and male differential reproductive success: young lineage expansions dominate Asian pastoral nomadic populations.

Authors:  Patricia Balaresque; Nicolas Poulet; Sylvain Cussat-Blanc; Patrice Gerard; Lluis Quintana-Murci; Evelyne Heyer; Mark A Jobling
Journal:  Eur J Hum Genet       Date:  2015-01-14       Impact factor: 4.246

5.  Africans in Yorkshire? The deepest-rooting clade of the Y phylogeny within an English genealogy.

Authors:  Turi E King; Emma J Parkin; Geoff Swinfield; Fulvio Cruciani; Rosaria Scozzari; Alexandra Rosa; Si-Keun Lim; Yali Xue; Chris Tyler-Smith; Mark A Jobling
Journal:  Eur J Hum Genet       Date:  2007-01-24       Impact factor: 4.246

6.  Novel Y-chromosome short tandem repeat sequence variation for loci DYS710, DYS518, DYS385, DYS644, DYS612, DYS626, DYS504, DYS481, DYS447 and DYS449.

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Journal:  Int J Legal Med       Date:  2019-04-13       Impact factor: 2.686

7.  Dynamic nature of the proximal AZFc region of the human Y chromosome: multiple independent deletion and duplication events revealed by microsatellite analysis.

Authors:  Patricia Balaresque; Georgina R Bowden; Emma J Parkin; Ghada A Omran; Evelyne Heyer; Lluis Quintana-Murci; Lutz Roewer; Mark Stoneking; Ivan Nasidze; Denise R Carvalho-Silva; Chris Tyler-Smith; Peter de Knijff; Mark A Jobling
Journal:  Hum Mutat       Date:  2008-10       Impact factor: 4.878

8.  Genomic complexity of the Y-STR DYS19: inversions, deletions and founder lineages carrying duplications.

Authors:  Patricia Balaresque; Emma J Parkin; Lutz Roewer; Denise R Carvalho-Silva; R John Mitchell; Roland A H van Oorschot; Jürgen Henke; Mark Stoneking; Ivan Nasidze; Jon Wetton; Peter de Knijff; Chris Tyler-Smith; Mark A Jobling
Journal:  Int J Legal Med       Date:  2008-06-14       Impact factor: 2.686

9.  Structural variation on the short arm of the human Y chromosome: recurrent multigene deletions encompassing Amelogenin Y.

Authors:  Mark A Jobling; Iek Chi C Lo; Daniel J Turner; Georgina R Bowden; Andrew C Lee; Yali Xue; Denise Carvalho-Silva; Matthew E Hurles; Susan M Adams; Yuet Meng Chang; Thirsa Kraaijenbrink; Jürgen Henke; Ginevra Guanti; Brian McKeown; Roland A H van Oorschot; R John Mitchell; Peter de Knijff; Chris Tyler-Smith; Emma J Parkin
Journal:  Hum Mol Genet       Date:  2006-12-22       Impact factor: 6.150

10.  Genetic diversity and the emergence of ethnic groups in Central Asia.

Authors:  Evelyne Heyer; Patricia Balaresque; Mark A Jobling; Lluis Quintana-Murci; Raphaelle Chaix; Laure Segurel; Almaz Aldashev; Tanya Hegay
Journal:  BMC Genet       Date:  2009-09-01       Impact factor: 2.797

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