Literature DB >> 16288888

Electron microscopic imaging of Ras signaling domains.

John F Hancock1, Ian A Prior.   

Abstract

Ras isoform-specific signaling from the plasma membrane appears to be regulated by interactions with distinct functional microdomains. We have developed protocols allowing the generation of 2-D spatial maps describing cell surface microdomain distributions. The combined electron microscopic (EM)-statistics approach provides nanometer scale resolution allowing both inner and outer leaflet domains to be visualized and cross-correlated with each other or with a protein of interest. In particular, the technique has allowed the interaction of Ras isoforms with signaling microdomains and proteins regulating these compartments to be screened. By allowing detailed monitoring of cell surface organization and compartmentalization, the approach has widespread potential for studies of plasma membrane-dependent cell biology, including regulated signaling and membrane trafficking.

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Year:  2005        PMID: 16288888      PMCID: PMC3351669          DOI: 10.1016/j.ymeth.2005.05.018

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  18 in total

1.  Differential activation of the Rac pathway by Ha-Ras and K-Ras.

Authors:  A B Walsh; D Bar-Sagi
Journal:  J Biol Chem       Date:  2001-02-14       Impact factor: 5.157

2.  Observing cell surface signaling domains using electron microscopy.

Authors:  Ian A Prior; Robert G Parton; John F Hancock
Journal:  Sci STKE       Date:  2003-04-08

Review 3.  The fence and picket structure of the plasma membrane of live cells as revealed by single molecule techniques (Review).

Authors:  Ken Ritchie; Ryoto Iino; Takahiro Fujiwara; Kotono Murase; Akihiro Kusumi
Journal:  Mol Membr Biol       Date:  2003 Jan-Mar       Impact factor: 2.857

4.  Three separable domains regulate GTP-dependent association of H-ras with the plasma membrane.

Authors:  Barak Rotblat; Ian A Prior; Cornelia Muncke; Robert G Parton; Yoel Kloog; Yoav I Henis; John F Hancock
Journal:  Mol Cell Biol       Date:  2004-08       Impact factor: 4.272

5.  Displaced amacrine cells in the retina of a rabbit: analysis of a bivariate spatial point pattern.

Authors:  P J Diggle
Journal:  J Neurosci Methods       Date:  1986-10       Impact factor: 2.390

6.  A new method of preparing gold probes for multiple-labeling cytochemistry.

Authors:  J W Slot; H J Geuze
Journal:  Eur J Cell Biol       Date:  1985-07       Impact factor: 4.492

Review 7.  ras oncogenes in human cancer: a review.

Authors:  J L Bos
Journal:  Cancer Res       Date:  1989-09-01       Impact factor: 12.701

8.  The murine N-ras gene is not essential for growth and development.

Authors:  H Umanoff; W Edelmann; A Pellicer; R Kucherlapati
Journal:  Proc Natl Acad Sci U S A       Date:  1995-02-28       Impact factor: 11.205

Review 9.  Lipid rafts and plasma membrane microorganization: insights from Ras.

Authors:  Robert G Parton; John F Hancock
Journal:  Trends Cell Biol       Date:  2004-03       Impact factor: 20.808

Review 10.  Plasma membrane microdomains: organization, function and trafficking.

Authors:  Alex J Laude; Ian A Prior
Journal:  Mol Membr Biol       Date:  2004 May-Jun       Impact factor: 2.857

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  29 in total

1.  The anti-inflammatory drug indomethacin alters nanoclustering in synthetic and cell plasma membranes.

Authors:  Yong Zhou; Sarah J Plowman; Lenard M Lichtenberger; John F Hancock
Journal:  J Biol Chem       Date:  2010-09-07       Impact factor: 5.157

Review 2.  Regulatory activity of polyunsaturated fatty acids in T-cell signaling.

Authors:  Wooki Kim; Naim A Khan; David N McMurray; Ian A Prior; Naisyin Wang; Robert S Chapkin
Journal:  Prog Lipid Res       Date:  2010-02-20       Impact factor: 16.195

3.  On the use of Ripley's K-function and its derivatives to analyze domain size.

Authors:  Maria A Kiskowski; John F Hancock; Anne K Kenworthy
Journal:  Biophys J       Date:  2009-08-19       Impact factor: 4.033

Review 4.  Plasma membrane regulates Ras signaling networks.

Authors:  Tanmay Sanjeev Chavan; Serena Muratcioglu; Richard Marszalek; Hyunbum Jang; Ozlem Keskin; Attila Gursoy; Ruth Nussinov; Vadim Gaponenko
Journal:  Cell Logist       Date:  2016-02-18

Review 5.  Lessons from computer simulations of Ras proteins in solution and in membrane.

Authors:  Priyanka Prakash; Alemayehu A Gorfe
Journal:  Biochim Biophys Acta       Date:  2013-07-30

6.  AMPK and Endothelial Nitric Oxide Synthase Signaling Regulates K-Ras Plasma Membrane Interactions via Cyclic GMP-Dependent Protein Kinase 2.

Authors:  Kwang-Jin Cho; Darren E Casteel; Priyanka Prakash; Lingxiao Tan; Dharini van der Hoeven; Angela A Salim; Choel Kim; Robert J Capon; Ernest Lacey; Shane R Cunha; Alemayehu A Gorfe; John F Hancock
Journal:  Mol Cell Biol       Date:  2016-11-28       Impact factor: 4.272

7.  Inhibition of Acid Sphingomyelinase Depletes Cellular Phosphatidylserine and Mislocalizes K-Ras from the Plasma Membrane.

Authors:  Kwang-Jin Cho; Dharini van der Hoeven; Yong Zhou; Masashi Maekawa; Xiaoping Ma; Wei Chen; Gregory D Fairn; John F Hancock
Journal:  Mol Cell Biol       Date:  2015-11-16       Impact factor: 4.272

Review 8.  Clinical relevance of KRAS in human cancers.

Authors:  Sylwia Jancík; Jirí Drábek; Danuta Radzioch; Marián Hajdúch
Journal:  J Biomed Biotechnol       Date:  2010-06-07

9.  K-ras nanoclustering is subverted by overexpression of the scaffold protein galectin-3.

Authors:  Ruby Shalom-Feuerstein; Sarah J Plowman; Barak Rotblat; Nicholas Ariotti; Tianhai Tian; John F Hancock; Yoel Kloog
Journal:  Cancer Res       Date:  2008-08-15       Impact factor: 12.701

10.  Docosahexaenoic acid alters the size and distribution of cell surface microdomains.

Authors:  Robert S Chapkin; Naisyin Wang; Yang-Yi Fan; Joanne R Lupton; Ian A Prior
Journal:  Biochim Biophys Acta       Date:  2007-11-17
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