Literature DB >> 16288769

Quantitative study of the structure-retention index relationship in the imine family.

Jorge Acevedo-Martínez1, Julio Cesar Escalona-Arranz, Alberto Villar-Rojas, Franklin Téllez-Palmero, Renato Pérez-Rosés, Luis González, Ramón Carrasco-Velar.   

Abstract

The Kováts retention index is one of the most popular descriptors of the performance of organic compounds in gas chromatography (GC). The mathematical modeling of this index is an interesting and open problem in analytical chemistry. In this paper, two models for the prediction of the Kováts retention index are presented. Topologic, topographic and quantum-chemical descriptors were used as structural descriptors. Multiple linear regression (MLR) analysis provides the first model using the forward stepwise procedure for the variable selection. For the second one, an ensemble of artificial neural network (ANN) was constructed using the pruning algorithm. Both methods were validated by an external set of compounds, by the Golbraikh and Tropsha method and by the leave-one-out (LOO) and the leave many out (LMO) procedures. The R2, RMScv and Q2, values for the training sets were 0.884, 0.589 and 0.830 for NN and 0.974, 0.417 and 0.970 for MLR models, respectively. The robustness of both models was demonstrated. Both portrait the chromatographic performance of the sample but in this case, the results of MLR equation are better than the NN ones. The MLR model is recommended because of its simplicity.

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Year:  2005        PMID: 16288769     DOI: 10.1016/j.chroma.2005.10.019

Source DB:  PubMed          Journal:  J Chromatogr A        ISSN: 0021-9673            Impact factor:   4.759


  4 in total

1.  Optimizing artificial neural network models for metabolomics and systems biology: an example using HPLC retention index data.

Authors:  L Mark Hall; Dennis W Hill; Lochana C Menikarachchi; Ming-Hui Chen; Lowell H Hall; David F Grant
Journal:  Bioanalysis       Date:  2015       Impact factor: 2.681

2.  Development of Ecom₅₀ and retention index models for nontargeted metabolomics: identification of 1,3-dicyclohexylurea in human serum by HPLC/mass spectrometry.

Authors:  L Mark Hall; Lowell H Hall; Tzipporah M Kertesz; Dennis W Hill; Thomas R Sharp; Edward Z Oblak; Ying W Dong; David S Wishart; Ming-Hui Chen; David F Grant
Journal:  J Chem Inf Model       Date:  2012-04-27       Impact factor: 4.956

3.  QSRR Modeling for Metabolite Standards Analyzed by Two Different Chromatographic Columns Using Multiple Linear Regression.

Authors:  Chrysostomi Zisi; Ioannis Sampsonidis; Stella Fasoula; Konstantinos Papachristos; Michael Witting; Helen G Gika; Panagiotis Nikitas; Adriani Pappa-Louisi
Journal:  Metabolites       Date:  2017-02-09

4.  QSAR models for CXCR2 receptor antagonists based on the genetic algorithm for data preprocessing prior to application of the PLS linear regression method and design of the new compounds using in silico virtual screening.

Authors:  Tahereh Asadollahi; Shayessteh Dadfarnia; Ali Mohammad Haji Shabani; Jahan B Ghasemi; Maryam Sarkhosh
Journal:  Molecules       Date:  2011-02-25       Impact factor: 4.411

  4 in total

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