Literature DB >> 16287102

Multiplexed microsatellites for rapid identification and characterization of individuals and populations of Cercopithecidae.

M Bonhomme1, A Blancher, B Crouau-Roy.   

Abstract

Cross-amplification of 15 human microsatellites was performed successfully in cynomolgus (Macaca fascicularis) and rhesus (M. mulatta) macaques and 11 other Cercopithecidae species of biomedical and conservation relevance. To allow for quick, efficient, and high-throughput genotyping to assess intra- and interspecific genetic variation, we performed three multiplex sets, each comprised of five markers from different parts of the genome (i.e., autosomes, the MHC region, and the X-chromosome). These multiplex sets are likely to reveal allelic divergence between taxa, which could be used for their discrimination. Population studies on three regional populations of M. fascicularis and one of M. mulatta revealed that most of the loci, with the exception of one monomorphic locus, displayed polymorphisms (the expected heterozygosities were 0.48-0.91 for M. fascicularis, and 0.61-0.93 for M. mulatta), which makes them useful for population genetics. For the multiplex set M1, including the nonlinked autosomal markers, low probabilities of identity were observed: P(ID) values ranged from 8 x 10(-7) to 3 x 10(-5). This multiplex set is reliable for forensic applications, such as individual identification, parentage testing, and kinship analysis, in wild and captive populations.

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Year:  2005        PMID: 16287102     DOI: 10.1002/ajp.20193

Source DB:  PubMed          Journal:  Am J Primatol        ISSN: 0275-2565            Impact factor:   2.371


  11 in total

1.  Lack of Evidence of Simian Immunodeficiency Virus Infection Among Nonhuman Primates in Taï National Park, Côte d'Ivoire: Limitations of Noninvasive Methods and SIV Diagnostic Tools for Studies of Primate Retroviruses.

Authors:  Sabrina Locatelli; Amy D Roeder; Michael W Bruford; Ronald Noë; Eric Delaporte; Martine Peeters
Journal:  Int J Primatol       Date:  2011-04       Impact factor: 2.264

2.  Variance in male lifetime reproductive success and estimation of the degree of polygyny in a primate.

Authors:  Constance Dubuc; Angelina Ruiz-Lambides; Anja Widdig
Journal:  Behav Ecol       Date:  2014-04-29       Impact factor: 2.671

3.  Study of MHC class II region polymorphism in the Filipino cynomolgus macaque population.

Authors:  A Blancher; A Aarnink; Y Yamada; K Tanaka; H Yamanaka; T Shiina
Journal:  Immunogenetics       Date:  2014-02-26       Impact factor: 2.846

4.  Impact of MHC class II polymorphism on blood counts of CD4+ T lymphocytes in macaque.

Authors:  Alice Aarnink; Henri-Jean Garchon; Bénédicte Puissant-Lubrano; Marie Blancher-Sardou; Pol-André Apoil; Antoine Blancher
Journal:  Immunogenetics       Date:  2010-11-18       Impact factor: 2.846

5.  Study of cynomolgus monkey (Macaca fascicularis) DRA polymorphism in four populations.

Authors:  Alice Aarnink; Laurent Estrade; Pol-André Apoil; Yuki F Kita; Naruya Saitou; Takashi Shiina; Antoine Blancher
Journal:  Immunogenetics       Date:  2010-01-22       Impact factor: 2.846

6.  Female rhesus macaques discriminate unfamiliar paternal sisters in playback experiments: support for acoustic phenotype matching.

Authors:  Dana Pfefferle; Angelina V Ruiz-Lambides; Anja Widdig
Journal:  Proc Biol Sci       Date:  2013-11-13       Impact factor: 5.349

7.  Use of Cumulative Poisson Probability Distribution as an Estimator of the Recombination Rate in an Expanding Population: Example of the Macaca fascicularis Major Histocompatibility Complex.

Authors:  Antoine Blancher; Alice Aarnink; Nicolas Savy; Naoyuki Takahata
Journal:  G3 (Bethesda)       Date:  2012-01-01       Impact factor: 3.154

8.  MHC polymorphism in Caribbean African green monkeys.

Authors:  A Aarnink; B Jacquelin; A Dauba; S Hébrard; E Moureaux; M Müller-Trutwin; A Blancher
Journal:  Immunogenetics       Date:  2014-03-28       Impact factor: 3.330

9.  MHC matching fails to prevent long-term rejection of iPSC-derived neurons in non-human primates.

Authors:  Romina Aron Badin; Aurore Bugi; Susannah Williams; Marta Vadori; Marie Michael; Caroline Jan; Alberto Nassi; Sophie Lecourtois; Antoine Blancher; Emanuele Cozzi; Philippe Hantraye; Anselme L Perrier
Journal:  Nat Commun       Date:  2019-09-25       Impact factor: 14.919

10.  Differential response of the cynomolgus macaque gut microbiota to Shigella infection.

Authors:  Anna M Seekatz; Aruna Panda; David A Rasko; Franklin R Toapanta; Emiley A Eloe-Fadrosh; Abdul Q Khan; Zhenqiu Liu; Steven T Shipley; Louis J Detolla; Marcelo B Sztein; Claire M Fraser
Journal:  PLoS One       Date:  2013-06-05       Impact factor: 3.240

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