Literature DB >> 16280490

Dokdonia donghaensis gen. nov., sp. nov., isolated from sea water.

Jung-Hoon Yoon1, So-Jung Kang1, Choong-Hwan Lee1, Tae-Kwang Oh1.   

Abstract

Two Gram-negative, non-motile, non-spore-forming, slightly halophilic bacterial strains, DSW-1T and DSW-21, were isolated from sea water and subjected to a polyphasic taxonomic study. They grew optimally at 30 degrees C and in the presence of 2 % (w/v) NaCl. Strains DSW-1T and DSW-21 were characterized chemotaxonomically as containing MK-6 as the predominant menaquinone and iso-C15 : 0, iso-C17 : 0 3-OH and iso-C15 : 1 as the major fatty acids. Their DNA G+C content was 38 mol%. Strains DSW-1T and DSW-21 exhibited four nucleotide differences in their 16S rRNA gene sequences and possessed a mean DNA-DNA relatedness level of 78 %. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strains DSW-1T and DSW-21 formed a distinct lineage within the family Flavobacteriaceae. The 16S rRNA gene sequences of strains DSW-1T and DSW-21 had similarity levels of less than 92 x 2 % to the sequences of other members of the family Flavobacteriaceae. There were some differences in phenotypic properties between the two strains and Cellulophaga species, the nearest phylogenetic neighbours. On the basis of phenotypic, phylogenetic and genetic data, strains DSW-1T (=KCTC 12391T=DSM 17200T) and DSW-21 were classified in a novel genus and species, Dokdonia donghaensis gen. nov., sp. nov.

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Year:  2005        PMID: 16280490     DOI: 10.1099/ijs.0.63817-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  7 in total

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3.  Natural hot spots for gain of multiple resistances: arsenic and antibiotic resistances in heterotrophic, aerobic bacteria from marine hydrothermal vent fields.

Authors:  Pedro Farias; Christophe Espírito Santo; Rita Branco; Romeu Francisco; Susana Santos; Lars Hansen; Soren Sorensen; Paula V Morais
Journal:  Appl Environ Microbiol       Date:  2015-01-30       Impact factor: 4.792

4.  Proteorhodopsin light-enhanced growth linked to vitamin-B1 acquisition in marine Flavobacteria.

Authors:  Laura Gómez-Consarnau; José M González; Thomas Riedel; Sebastian Jaenicke; Irene Wagner-Döbler; Sergio A Sañudo-Wilhelmy; Jed A Fuhrman
Journal:  ISME J       Date:  2015-11-17       Impact factor: 10.302

5.  Dokdonia ponticola sp. nov., A Carrageenan-Degrading Bacterium of the Family Flavobacteriaceae Isolated from Seawater.

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Journal:  Curr Microbiol       Date:  2018-05-14       Impact factor: 2.188

6.  Complete Genome Sequence of the Proteorhodopsin-Containing Marine Flavobacterium Dokdonia donghaensis DSW-1T, Isolated from Seawater off Dokdo in the East Sea (Sea of Korea).

Authors:  Kitae Kim; Soon-Kyeong Kwon; Jung-Hoon Yoon; Jihyun F Kim
Journal:  Genome Announc       Date:  2016-08-04

7.  Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T)).

Authors:  Thomas Riedel; Brittany Held; Matt Nolan; Susan Lucas; Alla Lapidus; Hope Tice; Tijana Glavina Del Rio; Jan-Fang Cheng; Cliff Han; Roxanne Tapia; Lynne A Goodwin; Sam Pitluck; Konstantinos Liolios; Konstantinos Mavromatis; Ioanna Pagani; Natalia Ivanova; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Manfred Rohde; Brian J Tindall; John C Detter; Markus Göker; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Tanja Woyke
Journal:  Stand Genomic Sci       Date:  2012-10-10
  7 in total

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