Literature DB >> 16277996

Information catastrophe in RNA viruses through replication thresholds.

Ricard V Solé1, Josep Sardanyés, Juana Díez, Antonio Mas.   

Abstract

RNA viruses are known to replicate at very high mutation rates. These rates are actually known to be close to their so-called error threshold. This threshold is in fact a critical point beyond which genetic information is lost through a so-called error catastrophe. However, the transition from a stable quasispecies to genetic drift and loss of information can also occur by crossing replication thresholds, below some replication rates, the viral population is suddenly unable to survive. Available data from hepatitis C virus population analysis [Mas, A., Ulloa, E., Bruguera, M., Furcić, I., Garriga, D., Fábregas, S., Andreu, D., Saiz, J.C., Díez, J., 2004. Hepatitis C virus population analysis of a single-source nosocomial outbreak reveals an inverse correlation between viral load and quasispecies complexity. J. Gen. Virol. 85, 3619-3626] can be interpreted through this theoretical view, providing evidence for such a replication threshold. Here a simple model is used in order to provide evidence for such a phenomenon, consistent with available data.

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Year:  2005        PMID: 16277996     DOI: 10.1016/j.jtbi.2005.09.024

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  8 in total

1.  Genomic mutation rates that neutralize adaptive evolution and natural selection.

Authors:  Philip J Gerrish; Alexandre Colato; Paul D Sniegowski
Journal:  J R Soc Interface       Date:  2013-05-29       Impact factor: 4.118

2.  Replication mode and landscape topology differentially affect RNA virus mutational load and robustness.

Authors:  Josep Sardanyés; Ricard V Solé; Santiago F Elena
Journal:  J Virol       Date:  2009-09-23       Impact factor: 5.103

3.  Abrupt transitions to tumor extinction: a phenotypic quasispecies model.

Authors:  Josep Sardanyés; Regina Martínez; Carles Simó; Ricard Solé
Journal:  J Math Biol       Date:  2016-10-06       Impact factor: 2.259

4.  Antigenic diversity, transmission mechanisms, and the evolution of pathogens.

Authors:  Alexander Lange; Neil M Ferguson
Journal:  PLoS Comput Biol       Date:  2009-10-16       Impact factor: 4.475

5.  Potential benefits of sequential inhibitor-mutagen treatments of RNA virus infections.

Authors:  Celia Perales; Rubén Agudo; Hector Tejero; Susanna C Manrubia; Esteban Domingo
Journal:  PLoS Pathog       Date:  2009-11-13       Impact factor: 6.823

6.  Trans-heteroclinic bifurcation: a novel type of catastrophic shift.

Authors:  Josep Sardanyés; Regina Martínez; Carles Simó
Journal:  R Soc Open Sci       Date:  2018-01-24       Impact factor: 2.963

Review 7.  Quasispecies and its impact on viral hepatitis.

Authors:  Esteban Domingo; Jordi Gomez
Journal:  Virus Res       Date:  2007-03-08       Impact factor: 3.303

Review 8.  Understanding the molecular epidemiology of foot-and-mouth-disease virus.

Authors:  Joern Klein
Journal:  Infect Genet Evol       Date:  2008-11-28       Impact factor: 3.342

  8 in total

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