Literature DB >> 16276119

Association of E-cadherin gene 3'-UTR C/T polymorphism with primary open angle glaucoma.

Hui-Ju Lin1, Fuu-Jen Tsai, Porting Hung, Wen-Chi Chen, Huey-Yi Chen, Seng-Sheen Fan, Shih-Wei Tsai.   

Abstract

PURPOSE: E-cadherin (E-CDH) is one of the most important cell surface glycoproteins involved in cell morphogenesis. In primary open angle glaucoma (POAG), the extracellular matrixes of trabecular meshwork and lamina cribrosa in the optic nerve head are out of balance. We suspected that E-CDH by way of metalloproteinases is closely related to POAG. We therefore investigated the relationship between CDH-1 gene 3' untranslated region (3'-UTR) polymorphism and POAG patients in order to support this hypothesis. PATIENTS AND METHODS: We enrolled 60 POAG patients and 103 healthy volunteers from the Department of Ophthalmology at the China Medical University Hospital, Taichung, Taiwan, ROC. None of the control subjects had a history of eye disease and all underwent the same examination as the POAG patients. PCR-based analysis of the restriction fragment length polymorphism was used to test the CDH-1 gene 3'-UTR polymorphism. All statistical analyses were performed by the chi(2) test. RESULT: There was a significant difference in the distribution of the CDH-1 gene 3'-UTR C/T polymorphism between POAG patients and the normal controls (p <0.000). The odds ratio of the 'C' allele was al so significantly different between both groups (odds ratio = 5.510, 95% confidence interval = 3.171-9.574).
CONCLUSION: CDH-1 is closely related to metalloproteinase and plays an important but not well-understood role in the onset and progression of POAG. The exact role of CDH-1 in POAG could be resolved by the posttranslated products of the gene and the protein-protein interaction of the gene products in the future.

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Year:  2005        PMID: 16276119     DOI: 10.1159/000089523

Source DB:  PubMed          Journal:  Ophthalmic Res        ISSN: 0030-3747            Impact factor:   2.892


  9 in total

Review 1.  A systematic analysis of disease-associated variants in the 3' regulatory regions of human protein-coding genes II: the importance of mRNA secondary structure in assessing the functionality of 3' UTR variants.

Authors:  Jian-Min Chen; Claude Férec; David N Cooper
Journal:  Hum Genet       Date:  2006-06-29       Impact factor: 4.132

Review 2.  Focus on molecular events in the anterior chamber leading to glaucoma.

Authors:  Sergio Claudio Saccà; Alberto Izzotti
Journal:  Cell Mol Life Sci       Date:  2013-10-19       Impact factor: 9.261

Review 3.  Genetics of primary open angle glaucoma.

Authors:  Mitsuko Takamoto; Makoto Araie
Journal:  Jpn J Ophthalmol       Date:  2013-11-21       Impact factor: 2.447

4.  E-cadherin gene 3'-UTR C/T polymorphism in Turkish patients with nephrolithiasis.

Authors:  Akin Yilmaz; Sevda Menevse; Metin Onaran; Ilker Sen; Mehmet Ali Ergun; Ahmet Camtosun; Bora Kupeli; Ibrahim Bozkirli
Journal:  Mol Biol Rep       Date:  2010-12-14       Impact factor: 2.316

Review 5.  Molecular complexity of primary open angle glaucoma: current concepts.

Authors:  Kunal Ray; Suddhasil Mookherjee
Journal:  J Genet       Date:  2009-12       Impact factor: 1.166

Review 6.  The genetics of primary open-angle glaucoma: a review.

Authors:  R Rand Allingham; Yutao Liu; Douglas J Rhee
Journal:  Exp Eye Res       Date:  2008-11-14       Impact factor: 3.467

7.  Association of IL1A and IL1B loci with primary open angle glaucoma.

Authors:  Suddhasil Mookherjee; Deblina Banerjee; Subhadip Chakraborty; Antara Banerjee; Indranil Mukhopadhyay; Abhijit Sen; Kunal Ray
Journal:  BMC Med Genet       Date:  2010-06-19       Impact factor: 2.103

8.  Polymorphism in the TNF-α(-863) locus associated with reduced risk of primary open angle glaucoma.

Authors:  Chun-Yuan Wang; Ying-Cheng Shen; Li-Chen Wei; Keng-Hung Lin; Shih-Chao Feng; Yi-Yin Yang; Chun-Hung Chiu; Hin-Yeung Tsai
Journal:  Mol Vis       Date:  2012-03-31       Impact factor: 2.367

9.  Epistatic Gene-Based Interaction Analyses for Glaucoma in eMERGE and NEIGHBOR Consortium.

Authors:  Shefali Setia Verma; Jessica N Cooke Bailey; Anastasia Lucas; Yuki Bradford; James G Linneman; Michael A Hauser; Louis R Pasquale; Peggy L Peissig; Murray H Brilliant; Catherine A McCarty; Jonathan L Haines; Janey L Wiggs; Tamara R Vrabec; Gerard Tromp; Marylyn D Ritchie
Journal:  PLoS Genet       Date:  2016-09-13       Impact factor: 5.917

  9 in total

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