Literature DB >> 16273053

'On-the-fly' or 'generate-first' modeling?

Michael L Blinov, James R Faeder, Jin Yang, Byron Goldstein, William S Hlavacek.   

Abstract

Mesh：

Year:  2005        PMID： 16273053     DOI： 10.1038/nbt1105-1344

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN： 1087-0156            Impact factor:   54.908


× No keyword cloud information.
  8 in total

1.  Scaffolding protein Grb2-associated binder 1 sustains epidermal growth factor-induced mitogenic and survival signaling by multiple positive feedback loops.

Authors:  Anatoly Kiyatkin; Edita Aksamitiene; Nick I Markevich; Nikolay M Borisov; Jan B Hoek; Boris N Kholodenko
Journal:  J Biol Chem       Date:  2006-05-09       Impact factor: 5.157

Review 2.  Multiscale models of cell signaling.

Authors:  Sameer S Bajikar; Kevin A Janes
Journal:  Ann Biomed Eng       Date:  2012-04-03       Impact factor: 3.934

3.  Detailed simulations of cell biology with Smoldyn 2.1.

Authors:  Steven S Andrews; Nathan J Addy; Roger Brent; Adam P Arkin
Journal:  PLoS Comput Biol       Date:  2010-03-12       Impact factor: 4.475

4.  RuleMonkey: software for stochastic simulation of rule-based models.

Authors:  Joshua Colvin; Michael I Monine; Ryan N Gutenkunst; William S Hlavacek; Daniel D Von Hoff; Richard G Posner
Journal:  BMC Bioinformatics       Date:  2010-07-30       Impact factor: 3.169

5.  Exact model reduction of combinatorial reaction networks.

Authors:  Holger Conzelmann; Dirk Fey; Ernst D Gilles
Journal:  BMC Syst Biol       Date:  2008-08-28

6.  ALC: automated reduction of rule-based models.

Authors:  Markus Koschorreck; Ernst Dieter Gilles
Journal:  BMC Syst Biol       Date:  2008-10-31

7.  Exact hybrid particle/population simulation of rule-based models of biochemical systems.

Authors:  Justin S Hogg; Leonard A Harris; Lori J Stover; Niketh S Nair; James R Faeder
Journal:  PLoS Comput Biol       Date:  2014-04-03       Impact factor: 4.475

8.  An Overview of Network-Based and -Free Approaches for Stochastic Simulation of Biochemical Systems.

Authors:  Abhishekh Gupta; Pedro Mendes
Journal:  Computation (Basel)       Date:  2018-01-31
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.