Literature DB >> 16272521

Phylogenetic analysis of the p24-p7 region of the human immunodeficiency virus type 1 gag gene to determine subtype distribution among female sex workers in Calcutta, India.

Satarupa Sengupta1, Smarajit Jana, Pratim Roy, Kamalesh Sarkar, Sujit K Bhattacharya, Sekhar Chakrabarti.   

Abstract

Human immunodeficiency virus type 1 (HIV-1) subtype C, based on the envelope region, has been reported to be predominant in India. We sequenced the p24-p7 gag region from 51 HIV-1 seropositive female sex workers in Calcutta, India, for more-detailed molecular characterization. Subtype C was found to be prevalent, although no strong monophyletic cluster was observed.

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Year:  2005        PMID： 16272521      PMCID： PMC1287808          DOI： 10.1128/JCM.43.11.5787-5791.2005

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  21 in total

1.  [Analysis of gag gene subtypes of HIV-1 variants isolated in Russia by comparative assessment of heteroduplex electrophoretic mobility].

Authors:  E V Kazennova; A F Bobkov; L M Selimova; T A Khanina; V V Pokrovskiĭ; L Heyndrickx; G Van der Groen
Journal:  Vopr Virusol       Date:  2001 May-Jun

2.  Molecular epidemiology of HIV type 1 infection in Portugal: high prevalence of non-B subtypes.

Authors:  Aida Esteves; Ricardo Parreira; Teresa Venenno; Margarida Franco; João Piedade; José Germano De Sousa; Wanda F Canas-Ferreira
Journal:  AIDS Res Hum Retroviruses       Date:  2002-03-20       Impact factor: 2.205

3.  The influence of the expanding HIV genetic diversity on molecular diagnosis in the Philippines.

Authors:  A Espantaleon; S Kageyama; M T Bernardo; T Nakano; P S Leaño; P Alban; R Abrenica; S Morimatsu; H Teraoka; D M Agdamag
Journal:  Int J STD AIDS       Date:  2003-02       Impact factor: 1.359

4.  HIV type 1 subtypes circulating in eastern and northeastern regions of India.

Authors:  Dibyakanti Mandal; S Jana; S K Bhattacharya; Sekhar Chakrabarti
Journal:  AIDS Res Hum Retroviruses       Date:  2002-11-01       Impact factor: 2.205

Review 5.  The clades of HIV: their origins and clinical significance.

Authors:  Justin Stebbing; Graeme Moyle
Journal:  AIDS Rev       Date:  2003 Oct-Dec       Impact factor: 2.500

6.  Simplified strategy for detection of recombinant human immunodeficiency virus type 1 group M isolates by gag/env heteroduplex mobility assay. Study Group on Heterogeneity of HIV Epidemics in African Cities.

Authors:  L Heyndrickx; W Janssens; L Zekeng; R Musonda; S Anagonou; G Van der Auwera; S Coppens; K Vereecken; K De Witte; R Van Rampelbergh; M Kahindo; L Morison; F E McCutchan; J K Carr; J Albert; M Essex; J Goudsmit; B Asjö; M Salminen; A Buvé; G van Der Groen
Journal:  J Virol       Date:  2000-01       Impact factor: 5.103

7.  Subtype & cytokine profiles of HIV infected individuals from south India.

Authors:  S Ramalingam; R Kannangai; T S Vijayakumar; D Mathai; O C Abraham; S Subramanian; P Rupali; M V Jesudason; G Sridharan
Journal:  Indian J Med Res       Date:  2005-04       Impact factor: 2.375

8.  Study of HIV type 1 gag/env variability in The Gambia, using a multiplex DNA polymerase chain reaction.

Authors:  F Cham; L Heyndrickx; W Janssens; G Van der Auwera; K Vereecken; K De Houwer; S Coppens; H Whittle; G van der Groen
Journal:  AIDS Res Hum Retroviruses       Date:  2000-11-20       Impact factor: 2.205

9.  Genomic diversity of human immunodeficiency virus type-1 in India.

Authors:  A K Sahni; V V S P Prasad; P Seth
Journal:  Int J STD AIDS       Date:  2002-02       Impact factor: 1.359

10.  Genetic and biological properties of HIV type 1 isolates prevalent in villagers of the Cameroon equatorial rain forests and grass fields: further evidence of broad HIV type 1 genetic diversity.

Authors:  Ping Zhong; Sherri BUrda; Frank Konings; Mateusz Urbanski; Liying Ma; Leopold Zekeng; Leonard Ewane; Lucy Agyingi; Moise Agwara; Ze E Afane; Thompson Kinge; Susan Zolla-Pazner; Phillipe Nyambi
Journal:  AIDS Res Hum Retroviruses       Date:  2003-12       Impact factor: 2.205
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  1 in total

Review 1.  Genetic architecture of HIV-1 genes circulating in north India & their functional implications.

Authors:  Ujjwal Neogi; Vikas Sood; Larence Ronsard; Jyotsna Singh; Sneh Lata; V G Ramachandran; S Das; Ajay Wanchu; Akhil C Banerjea
Journal:  Indian J Med Res       Date:  2011-12       Impact factor: 2.375
  1 in total

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