Literature DB >> 16269417

PRODISTIN Web Site: a tool for the functional classification of proteins from interaction networks.

Anaïs Baudot1, David Martin, Pierre Mouren, François Chevenet, Alain Guénoche, Bernard Jacq, Christine Brun.   

Abstract

UNLABELLED: The PRODISTIN Web Site is a web service allowing users to functionally classify genes/proteins from any type of interaction network. The resulting computation provides a classification tree in which (1) genes/proteins are clustered according to the identity of their interaction partners and (2) functional classes are delineated in the tree using the Biological Process Gene Ontology annotations. AVAILABILITY: The PRODISTIN Web Site is freely accessible at http://gin.univ-mrs.fr/webdistin

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Year:  2005        PMID： 16269417     DOI： 10.1093/bioinformatics/bti757

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  4 in total

1.  Differences in transcription between free-living and CO2-activated third-stage larvae of Haemonchus contortus.

Authors:  Cinzia Cantacessi; Bronwyn E Campbell; Neil D Young; Aaron R Jex; Ross S Hall; Paul J A Presidente; Jodi L Zawadzki; Weiwei Zhong; Boanerges Aleman-Meza; Alex Loukas; Paul W Sternberg; Robin B Gasser
Journal:  BMC Genomics       Date:  2010-04-27       Impact factor: 3.969

2.  TreeDyn: towards dynamic graphics and annotations for analyses of trees.

Authors:  François Chevenet; Christine Brun; Anne-Laure Bañuls; Bernard Jacq; Richard Christen
Journal:  BMC Bioinformatics       Date:  2006-10-10       Impact factor: 3.169

Review 3.  Network-based prediction of protein function.

Authors:  Roded Sharan; Igor Ulitsky; Ron Shamir
Journal:  Mol Syst Biol       Date:  2007-03-13       Impact factor: 11.429

4.  Defining a modular signalling network from the fly interactome.

Authors:  Anaïs Baudot; Jean-Baptiste Angelelli; Alain Guénoche; Bernard Jacq; Christine Brun
Journal:  BMC Syst Biol       Date:  2008-05-19
  4 in total

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