Literature DB >> 16269250

Cortical reconstruction using implicit surface evolution: accuracy and precision analysis.

Duygu Tosun1, Maryam E Rettmann, Daniel Q Naiman, Susan M Resnick, Michael A Kraut, Jerry L Prince.   

Abstract

Two different studies were conducted to assess the accuracy and precision of an algorithm developed for automatic reconstruction of the cerebral cortex from T1-weighted magnetic resonance (MR) brain images. Repeated scans of three different brains were used to quantify the precision of the algorithm, and manually selected landmarks on different sulcal regions throughout the cortex were used to analyze the accuracy of the three reconstructed surfaces: inner, central, and pial. We conclude that the algorithm can find these surfaces in a robust fashion and with subvoxel accuracy, typically with an accuracy of one third of a voxel, although this varies with brain region and cortical geometry. Parameters were adjusted on the basis of this analysis in order to improve the algorithm's overall performance.

Mesh:

Year:  2005        PMID: 16269250      PMCID: PMC4587757          DOI: 10.1016/j.neuroimage.2005.08.061

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  33 in total

1.  An MRI-based parcellation method for the temporal lobe.

Authors:  J J Kim; B Crespo-Facorro; N C Andreasen; D S O'Leary; B Zhang; G Harris; V A Magnotta
Journal:  Neuroimage       Date:  2000-04       Impact factor: 6.556

2.  Segmentation and measurement of the cortex from 3-D MR images using coupled-surfaces propagation.

Authors:  X Zeng; L H Staib; R T Schultz; J S Duncan
Journal:  IEEE Trans Med Imaging       Date:  1999-10       Impact factor: 10.048

3.  Automated 3-D extraction of inner and outer surfaces of cerebral cortex from MRI.

Authors:  D MacDonald; N Kabani; D Avis; A C Evans
Journal:  Neuroimage       Date:  2000-09       Impact factor: 6.556

4.  Automated sulcal segmentation using watersheds on the cortical surface.

Authors:  Maryam E Rettmann; Xiao Han; Chenyang Xu; Jerry L Prince
Journal:  Neuroimage       Date:  2002-02       Impact factor: 6.556

5.  Topology correction in brain cortex segmentation using a multiscale, graph-based algorithm.

Authors:  Xiao Han; Chenyang Xu; Ulisses Braga-Neto; Jerry L Prince
Journal:  IEEE Trans Med Imaging       Date:  2002-02       Impact factor: 10.048

6.  CRUISE: cortical reconstruction using implicit surface evolution.

Authors:  Xiao Han; Dzung L Pham; Duygu Tosun; Maryam E Rettmann; Chenyang Xu; Jerry L Prince
Journal:  Neuroimage       Date:  2004-11       Impact factor: 6.556

7.  An image-processing system for qualitative and quantitative volumetric analysis of brain images.

Authors:  A F Goldszal; C Davatzikos; D L Pham; M X Yan; R N Bryan; S M Resnick
Journal:  J Comput Assist Tomogr       Date:  1998 Sep-Oct       Impact factor: 1.826

8.  Cortical surface-based analysis. II: Inflation, flattening, and a surface-based coordinate system.

Authors:  B Fischl; M I Sereno; A M Dale
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

9.  Human frontal cortex: an MRI-based parcellation method.

Authors:  B Crespo-Facorro; J J Kim; N C Andreasen; D S O'Leary; A K Wiser; J M Bailey; G Harris; V A Magnotta
Journal:  Neuroimage       Date:  1999-11       Impact factor: 6.556

10.  Computational methods for reconstructing and unfolding the cerebral cortex.

Authors:  G J Carman; H A Drury; D C Van Essen
Journal:  Cereb Cortex       Date:  1995 Nov-Dec       Impact factor: 5.357

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  22 in total

1.  Longitudinal changes in cortical thickness associated with normal aging.

Authors:  Madhav Thambisetty; Jing Wan; Aaron Carass; Yang An; Jerry L Prince; Susan M Resnick
Journal:  Neuroimage       Date:  2010-05-02       Impact factor: 6.556

Review 2.  Methods on Skull Stripping of MRI Head Scan Images-a Review.

Authors:  P Kalavathi; V B Surya Prasath
Journal:  J Digit Imaging       Date:  2016-06       Impact factor: 4.056

3.  Hippocampus-specific fMRI group activation analysis using the continuous medial representation.

Authors:  Paul A Yushkevich; John A Detre; Dawn Mechanic-Hamilton; María A Fernández-Seara; Kathy Z Tang; Angela Hoang; Marc Korczykowski; Hui Zhang; James C Gee
Journal:  Neuroimage       Date:  2007-02-22       Impact factor: 6.556

4.  Topology correction of segmented medical images using a fast marching algorithm.

Authors:  Pierre-Louis Bazin; Dzung L Pham
Journal:  Comput Methods Programs Biomed       Date:  2007-10-17       Impact factor: 5.428

5.  Reconstruction of the human cerebral cortex robust to white matter lesions: method and validation.

Authors:  Navid Shiee; Pierre-Louis Bazin; Jennifer L Cuzzocreo; Chuyang Ye; Bhaskar Kishore; Aaron Carass; Peter A Calabresi; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  Hum Brain Mapp       Date:  2013-12-31       Impact factor: 5.038

6.  LOGISMOS-B: layered optimal graph image segmentation of multiple objects and surfaces for the brain.

Authors:  Ipek Oguz; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2014-02-07       Impact factor: 10.048

7.  Comparing fully automated state-of-the-art cerebellum parcellation from magnetic resonance images.

Authors:  Aaron Carass; Jennifer L Cuzzocreo; Shuo Han; Carlos R Hernandez-Castillo; Paul E Rasser; Melanie Ganz; Vincent Beliveau; Jose Dolz; Ismail Ben Ayed; Christian Desrosiers; Benjamin Thyreau; José E Romero; Pierrick Coupé; José V Manjón; Vladimir S Fonov; D Louis Collins; Sarah H Ying; Chiadi U Onyike; Deana Crocetti; Bennett A Landman; Stewart H Mostofsky; Paul M Thompson; Jerry L Prince
Journal:  Neuroimage       Date:  2018-08-09       Impact factor: 6.556

8.  Simple paradigm for extra-cerebral tissue removal: algorithm and analysis.

Authors:  Aaron Carass; Jennifer Cuzzocreo; M Bryan Wheeler; Pierre-Louis Bazin; Susan M Resnick; Jerry L Prince
Journal:  Neuroimage       Date:  2011-03-31       Impact factor: 6.556

9.  An integrated multimodality MR brain imaging study: gray matter tissue loss mediates the association between cerebral hypoperfusion and Alzheimer's disease.

Authors:  Duygu Tosun; Norbert Schuff; Michael Weiner
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2009

10.  A geometry-driven optical flow warping for spatial normalization of cortical surfaces.

Authors:  Duygu Tosun; Jerry L Prince
Journal:  IEEE Trans Med Imaging       Date:  2008-12       Impact factor: 10.048

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