Literature DB >> 16269238

Digital staining for multispectral images of pathological tissue specimens based on combined classification of spectral transmittance.

Pinky A Bautista1, Tokiya Abe, Masahiro Yamaguchi, Yukako Yagi, Nagaaki Ohyama.   

Abstract

In this study, the digital transformation (digital staining) of the 16-band multispectral image of a hematoxylin and eosin (HE) stained pathological specimen to its Masson's trichrome (MT) stained counterpart is addressed. The digital staining procedure involves the classification of the various H&E-stained tissue components and then the transformation of their transmittance spectra to their equivalent MT-stained transmittance configurations. Combination of transmittance classifiers were designed to classify the various tissue components found in the multispectral images of an HE-stained specimen, e.g. nucleus, cytoplasm, red blood cell (RBC), fibrosis, etc.; while pseudo-inverse method was used to obtain the transformation matrices that would translate the transmittance spectra of the classified HE-stained multispectral pixels to their MT-stained configurations. To generate the digitally stained image, weighting factors, which were based on the classifiers beliefs, were introduced to the generated transformation matrices. Initial results of our experiments on liver specimens show the viability of multispectral imaging (MSI) to implement a digital staining framework in the pathological context.

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Year:  2005        PMID: 16269238     DOI: 10.1016/j.compmedimag.2005.09.003

Source DB:  PubMed          Journal:  Comput Med Imaging Graph        ISSN: 0895-6111            Impact factor:   4.790


  5 in total

1.  Confocal mosaicing microscopy of human skin ex vivo: spectral analysis for digital staining to simulate histology-like appearance.

Authors:  Jason Bini; James Spain; Kishwer Nehal; Vikki Hazelwood; Charles DiMarzio; Milind Rajadhyaksha
Journal:  J Biomed Opt       Date:  2011-07       Impact factor: 3.170

2.  Detection of pancreatic tumor cell nuclei via a hyperspectral analysis of pathological slides based on stain spectra.

Authors:  Masahiro Ishikawa; Chisato Okamoto; Kazuma Shinoda; Hideki Komagata; Chika Iwamoto; Kenoki Ohuchida; Makoto Hashizume; Akinobu Shimizu; Naoki Kobayashi
Journal:  Biomed Opt Express       Date:  2019-08-09       Impact factor: 3.732

3.  Dual-mode emission and transmission microscopy for virtual histochemistry using hematoxylin- and eosin-stained tissue sections.

Authors:  Farzad Fereidouni; Austin Todd; Yuheng Li; Che-Wei Chang; Keith Luong; Avi Rosenberg; Yong-Jae Lee; James W Chan; Alexander Borowsky; Karen Matsukuma; Kuang-Yu Jen; Richard Levenson
Journal:  Biomed Opt Express       Date:  2019-11-26       Impact factor: 3.732

4.  Use of Deep Learning to Develop and Analyze Computational Hematoxylin and Eosin Staining of Prostate Core Biopsy Images for Tumor Diagnosis.

Authors:  Aman Rana; Alarice Lowe; Marie Lithgow; Katharine Horback; Tyler Janovitz; Annacarolina Da Silva; Harrison Tsai; Vignesh Shanmugam; Akram Bayat; Pratik Shah
Journal:  JAMA Netw Open       Date:  2020-05-01

5.  Automated Structural Analysis and Quantitative Characterization of Scar Tissue Using Machine Learning.

Authors:  Luluil Maknuna; Hyeonsoo Kim; Yeachan Lee; Yoonjin Choi; Hyunjung Kim; Myunggi Yi; Hyun Wook Kang
Journal:  Diagnostics (Basel)       Date:  2022-02-19
  5 in total

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