Literature DB >> 16258010

An egg apparatus-specific enhancer of Arabidopsis, identified by enhancer detection.

Wei Yang1, Richard A Jefferson, Eric Huttner, James M Moore, Wendy B Gagliano, Ueli Grossniklaus.   

Abstract

Despite a central role in angiosperm reproduction, few gametophyte-specific genes and promoters have been isolated, particularly for the inaccessible female gametophyte (embryo sac). Using the Ds-based enhancer-detector line ET253, we have cloned an egg apparatus-specific enhancer (EASE) from Arabidopsis (Arabidopsis thaliana). The genomic region flanking the Ds insertion site was further analyzed by examining its capability to control gusA and GFP reporter gene expression in the embryo sac in a transgenic context. Through analysis of a 5' and 3' deletion series in transgenic Arabidopsis, the sequence responsible for egg apparatus-specific expression was delineated to 77 bp. Our data showed that this enhancer is unique in the Arabidopsis genome, is conserved among different accessions, and shows an unusual pattern of sequence variation. This EASE works independently of position and orientation in Arabidopsis but is probably not associated with any nearby gene, suggesting either that it acts over a large distance or that a cryptic element was detected. Embryo-specific ablation in Arabidopsis was achieved by transactivation of a diphtheria toxin gene under the control of the EASE. The potential application of the EASE element and similar control elements as part of an open-source biotechnology toolkit for apomixis is discussed.

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Year:  2005        PMID: 16258010      PMCID: PMC1283777          DOI: 10.1104/pp.105.068262

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  56 in total

1.  Analysis of flanking sequences from dissociation insertion lines: a database for reverse genetics in Arabidopsis.

Authors:  S Parinov; M Sevugan; D Ye; W C Yang; M Kumaran; V Sundaresan
Journal:  Plant Cell       Date:  1999-12       Impact factor: 11.277

Review 2.  Genetics of gametophyte biogenesis in Arabidopsis.

Authors:  W C Yang; V Sundaresan
Journal:  Curr Opin Plant Biol       Date:  2000-02       Impact factor: 7.834

3.  Generation of enhancer trap lines in Arabidopsis and characterization of expression patterns in the inflorescence.

Authors:  L Campisi; Y Yang; Y Yi; E Heilig; B Herman; A J Cassista; D W Allen; H Xiang; T Jack
Journal:  Plant J       Date:  1999-03       Impact factor: 6.417

Review 4.  Apomixis: a developmental perspective.

Authors:  Anna M Koltunow; Ueli Grossniklaus
Journal:  Annu Rev Plant Biol       Date:  2003       Impact factor: 26.379

Review 5.  Female gametophyte development.

Authors:  Ramin Yadegari; Gary N Drews
Journal:  Plant Cell       Date:  2004-04-09       Impact factor: 11.277

6.  cis-regulatory elements of the peroxidase gene in Arabidopsis thaliana involved in root-specific expression and responsiveness to high-salt stress.

Authors:  C Wanapu; A Shinmyo
Journal:  Ann N Y Acad Sci       Date:  1996-05-15       Impact factor: 5.691

Review 7.  The molecular and genetic basis of ovule and megagametophyte development.

Authors:  U Grossniklaus; K Schneitz
Journal:  Semin Cell Dev Biol       Date:  1998-04       Impact factor: 7.727

8.  Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

Authors:  F Tajima
Journal:  Genetics       Date:  1989-11       Impact factor: 4.562

9.  Novel GUS expression patterns following transposition of an enhancer trap Ds element in Arabidopsis.

Authors:  V I Klimyuk; L Nussaume; K Harrison; J D Jones
Journal:  Mol Gen Genet       Date:  1995-12-10

10.  The lateral organ boundaries gene defines a novel, plant-specific gene family.

Authors:  Bin Shuai; Cristina G Reynaga-Peña; Patricia S Springer
Journal:  Plant Physiol       Date:  2002-06       Impact factor: 8.340

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  11 in total

1.  A versatile and reliable two-component system for tissue-specific gene induction in Arabidopsis.

Authors:  Lukas Brand; Mirjam Hörler; Eveline Nüesch; Sara Vassalli; Philippa Barrell; Wei Yang; Richard A Jefferson; Ueli Grossniklaus; Mark D Curtis
Journal:  Plant Physiol       Date:  2006-08       Impact factor: 8.340

2.  A DNA element between At4g28630 and At4g28640 confers companion-cell specific expression following the sink-to-source transition in mature minor vein phloem.

Authors:  Roisin C McGarry; Brian G Ayre
Journal:  Planta       Date:  2008-08-06       Impact factor: 4.116

Review 3.  Nuclear behavior, cell polarity, and cell specification in the female gametophyte.

Authors:  Stefanie Sprunck; Rita Gross-Hardt
Journal:  Sex Plant Reprod       Date:  2011-02-19

Review 4.  Patterning the Female Gametophyte of Flowering Plants.

Authors:  Dawit G Tekleyohans; Thomas Nakel; Rita Groß-Hardt
Journal:  Plant Physiol       Date:  2016-12-05       Impact factor: 8.340

5.  Transgenic manipulation of plant embryo sacs tracked through cell-type-specific fluorescent markers: cell labeling, cell ablation, and adventitious embryos.

Authors:  Shai J Lawit; Mark A Chamberlin; April Agee; Eric S Caswell; Marc C Albertsen
Journal:  Plant Reprod       Date:  2013-03-29       Impact factor: 3.767

6.  Genome-Wide Prediction and Validation of Intergenic Enhancers in Arabidopsis Using Open Chromatin Signatures.

Authors:  Bo Zhu; Wenli Zhang; Tao Zhang; Bao Liu; Jiming Jiang
Journal:  Plant Cell       Date:  2015-09-15       Impact factor: 11.277

7.  The prevalence, evolution and chromatin signatures of plant regulatory elements.

Authors:  Zefu Lu; Alexandre P Marand; William A Ricci; Christina L Ethridge; Xiaoyu Zhang; Robert J Schmitz
Journal:  Nat Plants       Date:  2019-11-18       Impact factor: 15.793

8.  pMAA-Red: a new pPZP-derived vector for fast visual screening of transgenic Arabidopsis plants at the seed stage.

Authors:  Muhammad Amjad Ali; Kausar Hussain Shah; Holger Bohlmann
Journal:  BMC Biotechnol       Date:  2012-07-02       Impact factor: 2.563

9.  When Double is not Twice as Much.

Authors:  Theresa Maria Singer; Cordula Moll; Rita Groß-Hardt
Journal:  Front Plant Sci       Date:  2011-12-09       Impact factor: 5.753

10.  Egg cell-specific promoter-controlled CRISPR/Cas9 efficiently generates homozygous mutants for multiple target genes in Arabidopsis in a single generation.

Authors:  Zhi-Ping Wang; Hui-Li Xing; Li Dong; Hai-Yan Zhang; Chun-Yan Han; Xue-Chen Wang; Qi-Jun Chen
Journal:  Genome Biol       Date:  2015-07-21       Impact factor: 13.583

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