Literature DB >> 16257532

Simple b ions have cyclic oxazolone structures. A neutralization-reionization mass spectrometric and computational study of oxazolone radicals.

Xiaohong Chen1, Frantisek Turecek.   

Abstract

The 2-methyloxazol-5-on-2-yl radical (3) and its deuterium labeled analogs were generated in the gas-phase by femtosecond electron-transfer and studied by neutralization-reionization mass spectrometry and quantum chemical calculations. Radical 3 undergoes fast dissociation by ring opening and elimination of CO and CH(3)CO. Loss of hydrogen is less abundant and involves hydrogen atoms from both the ring and side-chain positions. The experimental results are corroborated by the analysis of the potential energy surface of the ground electronic state in 3 using density functional, perturbational, and coupled-cluster theories up to CCSD(T) and extrapolated to the 6-311 ++ G(3df,2p) basis set. RRKM calculations of radical dissociations gave branching ratios for loss of CO and H that were k(CO)/k(H) > 10 over an 80-300 kJ mol(-1) range of internal energies. The driving force for the dissociations of 3 is provided by large Franck-Condon effects on vertical neutralization and possibly from involvement of excited electronic states. Calculations also provided the adiabatic ionization energy of 3, IE(adiab) = 5.48 eV and vertical recombination energy of cation 3(+), RE(vert) = 4.70 eV. The present results strongly indicate that oxazolone structures can explain fragmentations of b-type peptide ions upon electron capture, contrary to previous speculations.

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Year:  2005        PMID: 16257532     DOI: 10.1016/j.jasms.2005.07.023

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  15 in total

1.  Electron capture dissociation of b (2+) peptide fragments reveals the presence of the acylium ion structure.

Authors:  K F Haselmann; B A Budnik; R A Zubarev
Journal:  Rapid Commun Mass Spectrom       Date:  2000       Impact factor: 2.419

2.  Proton mobility and main fragmentation pathways of protonated lysylglycine.

Authors:  I P Csonka; B Paizs; G Lendvay; S Suhai
Journal:  Rapid Commun Mass Spectrom       Date:  2001       Impact factor: 2.419

Review 3.  Fragmentation pathways of protonated peptides.

Authors:  Béla Paizs; Sándor Suhai
Journal:  Mass Spectrom Rev       Date:  2005 Jul-Aug       Impact factor: 10.946

4.  Effects of charge state and cationizing agent on the electron capture dissociation of a peptide.

Authors:  Anthony T Iavarone; Kolja Paech; Evan R Williams
Journal:  Anal Chem       Date:  2004-04-15       Impact factor: 6.986

5.  Novel tandem quadrupole-acceleration-deceleration mass spectrometer for neutralization-reionization studies.

Authors:  F Turecek; M Gu; S A Shaffer
Journal:  J Am Soc Mass Spectrom       Date:  1992-07       Impact factor: 3.109

6.  Formation of a2+ ions of protonated peptides. An ab initio study.

Authors:  B Paizs; Z Szlávik; G Lendvay; K Vékey; S Suhai
Journal:  Rapid Commun Mass Spectrom       Date:  2000       Impact factor: 2.419

7.  Are the enolates of amides and esters stabilized by electrostatics?

Authors:  Paul R Rablen; Keith H Bentrup
Journal:  J Am Chem Soc       Date:  2003-02-26       Impact factor: 15.419

8.  Why Are B ions stable species in peptide spectra?

Authors:  T Yalcin; C Khouw; I G Csizmadia; M R Peterson; A G Harrison
Journal:  J Am Soc Mass Spectrom       Date:  1995-12       Impact factor: 3.109

9.  Energy effects in collisional neutralization with organic molecules.

Authors:  V Q Nguyen; F Turecek
Journal:  J Mass Spectrom       Date:  1996-08       Impact factor: 1.982

10.  Mechanism and energetics of intramolecular hydrogen transfer in amide and peptide radicals and cation-radicals.

Authors:  Frantisek Turecek; Erik A Syrstad
Journal:  J Am Chem Soc       Date:  2003-03-19       Impact factor: 15.419

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  8 in total

1.  Rearrangement pathways of the a (4) ion of protonated YGGFL characterized by IR spectroscopy and modeling.

Authors:  Béla Paizs; Benjamin J Bythell; Philippe Maître
Journal:  J Am Soc Mass Spectrom       Date:  2012-01-24       Impact factor: 3.109

2.  Gas-phase structure and fragmentation pathways of singly protonated peptides with N-terminal arginine.

Authors:  Benjamin J Bythell; István P Csonka; Sándor Suhai; Douglas F Barofsky; Béla Paizs
Journal:  J Phys Chem B       Date:  2010-10-25       Impact factor: 2.991

3.  Why are a(3) ions rarely observed?

Authors:  Julia M Allen; Alawee H Racine; Ashley M Berman; Jeffrey S Johnson; Benjamin J Bythell; Béla Paizs; Gary L Glish
Journal:  J Am Soc Mass Spectrom       Date:  2008-09-30       Impact factor: 3.109

4.  Backbone and side-chain specific dissociations of z ions from non-tryptic peptides.

Authors:  Thomas W Chung; Frantisek Turecek
Journal:  J Am Soc Mass Spectrom       Date:  2010-02-18       Impact factor: 3.109

5.  Substance P in the Gas Phase: Conformational Changes and Dissociations Induced by Collisional Activation in a Drift Tube.

Authors:  Christopher R Conant; Daniel R Fuller; Zhichao Zhang; Daniel W Woodall; David H Russell; David E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  2019-04-12       Impact factor: 3.109

6.  Structural heterogeneity of doubly-charged peptide b-ions.

Authors:  Xiaojuan Li; Yiqun Huang; Peter B O'Connor; Cheng Lin
Journal:  J Am Soc Mass Spectrom       Date:  2011-01-29       Impact factor: 3.109

7.  Cyclization reaction of peptide fragment ions during multistage collisionally activated decomposition: an inducement to lose internal amino-acid residues.

Authors:  Chenxi Jia; Wei Qi; Zhimin He
Journal:  J Am Soc Mass Spectrom       Date:  2007-01-17       Impact factor: 3.109

8.  Relative stability of peptide sequence ions generated by tandem mass spectrometry.

Authors:  Benjamin J Bythell; Christopher L Hendrickson; Alan G Marshall
Journal:  J Am Soc Mass Spectrom       Date:  2012-02-22       Impact factor: 3.109

  8 in total

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