Literature DB >> 16249991

The impact of bacterial genomics on natural product research.

Helge B Bode1, Rolf Müller.   

Abstract

"There's life in the old dog yet!" This adage also holds true for natural product research. After the era of natural products was declared to be over, because of the introduction of combinatorial synthesis techniques, natural product research has taken a surprising turn back towards a major field of pharmaceutical research. Current challenges, such as emerging multidrug-resistant bacteria, might be overcome by developments which combine genomic knowledge with applied biology and chemistry to identify, produce, and alter the structure of new lead compounds. Significant biological activity is reported much less frequently for synthetic compounds, a fact reflected in the large proportion of natural products and their derivatives in clinical use. This Review describes the impact of microbial genomics on natural products research, in particularly the search for new lead structures and their optimization. The limitations of this research are also discussed, thus allowing a look into future developments.

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Year:  2005        PMID: 16249991     DOI: 10.1002/anie.200501080

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  56 in total

1.  Full-length RecE enhances linear-linear homologous recombination and facilitates direct cloning for bioprospecting.

Authors:  Jun Fu; Xiaoying Bian; Shengbaio Hu; Hailong Wang; Fan Huang; Philipp M Seibert; Alberto Plaza; Liqiu Xia; Rolf Müller; A Francis Stewart; Youming Zhang
Journal:  Nat Biotechnol       Date:  2012-05       Impact factor: 54.908

Review 2.  Natural products as chemical probes.

Authors:  Erin E Carlson
Journal:  ACS Chem Biol       Date:  2010-07-16       Impact factor: 5.100

3.  Identification of benzo[a]pyrene-metabolizing bacteria in forest soils by using DNA-based stable-isotope probing.

Authors:  Mengke Song; Chunling Luo; Longfei Jiang; Dayi Zhang; Yujie Wang; Gan Zhang
Journal:  Appl Environ Microbiol       Date:  2015-08-07       Impact factor: 4.792

4.  Bacteria of the Roseobacter clade show potential for secondary metabolite production.

Authors:  Torben Martens; Lone Gram; Hans-Peter Grossart; Daniel Kessler; Rolf Müller; Meinhard Simon; Silke C Wenzel; Thorsten Brinkhoff
Journal:  Microb Ecol       Date:  2007-03-10       Impact factor: 4.552

Review 5.  Analysis of myxobacterial secondary metabolism goes molecular.

Authors:  Helge B Bode; Rolf Müller
Journal:  J Ind Microbiol Biotechnol       Date:  2006-02-21       Impact factor: 3.346

6.  A phosphopantetheinylating polyketide synthase producing a linear polyene to initiate enediyne antitumor antibiotic biosynthesis.

Authors:  Jian Zhang; Steven G Van Lanen; Jianhua Ju; Wen Liu; Pieter C Dorrestein; Wenli Li; Neil L Kelleher; Ben Shen
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-25       Impact factor: 11.205

Review 7.  Symbiosis-inspired approaches to antibiotic discovery.

Authors:  Navid Adnani; Scott R Rajski; Tim S Bugni
Journal:  Nat Prod Rep       Date:  2017-07-06       Impact factor: 13.423

Review 8.  Natural products: a continuing source of novel drug leads.

Authors:  Gordon M Cragg; David J Newman
Journal:  Biochim Biophys Acta       Date:  2013-02-18

9.  Escherichia coli allows efficient modular incorporation of newly isolated quinomycin biosynthetic enzyme into echinomycin biosynthetic pathway for rational design and synthesis of potent antibiotic unnatural natural product.

Authors:  Kenji Watanabe; Kinya Hotta; Mino Nakaya; Alex P Praseuth; Clay C C Wang; Daiki Inada; Kosaku Takahashi; Eri Fukushi; Hiroki Oguri; Hideaki Oikawa
Journal:  J Am Chem Soc       Date:  2009-07-08       Impact factor: 15.419

10.  Diversity and functional analysis of LuxR-type transcriptional regulators of cyclic lipopeptide biosynthesis in Pseudomonas fluorescens.

Authors:  I de Bruijn; J M Raaijmakers
Journal:  Appl Environ Microbiol       Date:  2009-05-15       Impact factor: 4.792

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