Literature DB >> 16249938

DNA methylation and epigenetic inheritance during plant gametogenesis.

Shin Takeda1, Jerzy Paszkowski.   

Abstract

In plants, newly acquired epigenetic states of transcriptional gene activity are readily transmitted to the progeny. This is in contrast to mammals, where only rare cases of transgenerational inheritance of new epigenetic traits have been reported (FASEB J 12:949-957, 1998; Nat Genet 23:314-318, 1999; Proc Natl Acad Sci U S A 100:2538-2543, 2003). Epigenetic inheritance in plants seems to rely on cytosine methylation maintained through meiosis and postmeiotic mitoses, giving rise to gametophytes. In particular, maintenance of CpG methylation ((m)CpG) appears to play a central role, guiding the distribution of other epigenetic signals such as histone H3 methylation and non-CpG DNA methylation. The evolutionarily conserved DNA methyltransferase MET1 is responsible for copying (m)CpG patterns through DNA replication in the gametophytic phase. The importance of gametophytic MET1 activity is illustrated by the phenotypes of met1 mutants that are severely compromised in the accuracy of epigenetic inheritance during gametogenesis. This includes elimination of imprinting at paternally silent loci such as FWA or MEDEA (MEA). The importance of DNA methylation in gametophytic imprinting has been reinforced by the discovery of DEMETER (DME), encoding putative DNA glycosylase involved in the removal of (m)C. DME opposes transcriptional silencing associated with imprinting activities of the MEA/FIE polycomb group complex.

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Year:  2005        PMID: 16249938     DOI: 10.1007/s00412-005-0031-7

Source DB:  PubMed          Journal:  Chromosoma        ISSN: 0009-5915            Impact factor:   4.316


  73 in total

1.  Release of epigenetic gene silencing by trans-acting mutations in Arabidopsis.

Authors:  O Mittelsten Scheid; K Afsar; J Paszkowski
Journal:  Proc Natl Acad Sci U S A       Date:  1998-01-20       Impact factor: 11.205

2.  The late flowering phenotype of fwa mutants is caused by gain-of-function epigenetic alleles of a homeodomain gene.

Authors:  W J Soppe; S E Jacobsen; C Alonso-Blanco; J P Jackson; T Kakutani; M Koornneef; A J Peeters
Journal:  Mol Cell       Date:  2000-10       Impact factor: 17.970

Review 3.  Female gametophyte development.

Authors:  Ramin Yadegari; Gary N Drews
Journal:  Plant Cell       Date:  2004-04-09       Impact factor: 11.277

4.  Maintenance of genomic imprinting at the Arabidopsis medea locus requires zygotic DDM1 activity.

Authors:  J P Vielle-Calzada; J Thomas; C Spillane; A Coluccio; M A Hoeppner; U Grossniklaus
Journal:  Genes Dev       Date:  1999-11-15       Impact factor: 11.361

5.  Identification of Arabidopsis histone deacetylase HDA6 mutants that affect transgene expression.

Authors:  J Murfett; X J Wang; G Hagen; T J Guilfoyle
Journal:  Plant Cell       Date:  2001-05       Impact factor: 11.277

6.  Maintenance of genomic methylation requires a SWI2/SNF2-like protein.

Authors:  J A Jeddeloh; T L Stokes; E J Richards
Journal:  Nat Genet       Date:  1999-05       Impact factor: 38.330

7.  The Polycomb-group protein MEDEA regulates seed development by controlling expression of the MADS-box gene PHERES1.

Authors:  Claudia Köhler; Lars Hennig; Charles Spillane; Stephane Pien; Wilhelm Gruissem; Ueli Grossniklaus
Journal:  Genes Dev       Date:  2003-06-15       Impact factor: 11.361

8.  ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase.

Authors:  Zhizhong Gong; Teresa Morales-Ruiz; Rafael R Ariza; Teresa Roldán-Arjona; Lisa David; Jian Kang Zhu
Journal:  Cell       Date:  2002-12-13       Impact factor: 41.582

9.  Su(z)12, a novel Drosophila Polycomb group gene that is conserved in vertebrates and plants.

Authors:  A Birve; A K Sengupta; D Beuchle; J Larsson; J A Kennison; J Müller
Journal:  Development       Date:  2001-09       Impact factor: 6.868

10.  Parent-of-origin effects on seed development in Arabidopsis thaliana.

Authors:  R J Scott; M Spielman; J Bailey; H G Dickinson
Journal:  Development       Date:  1998-09       Impact factor: 6.868

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  18 in total

1.  Maintenance of DNA methylation during the Arabidopsis life cycle is essential for parental imprinting.

Authors:  Pauline E Jullien; Tetsu Kinoshita; Nir Ohad; Frédéric Berger
Journal:  Plant Cell       Date:  2006-04-28       Impact factor: 11.277

2.  Autocatalytic differentiation of epigenetic modifications within the Arabidopsis genome.

Authors:  Soichi Inagaki; Asuka Miura-Kamio; Yasukazu Nakamura; Falong Lu; Xia Cui; Xiaofeng Cao; Hiroshi Kimura; Hidetoshi Saze; Tetsuji Kakutani
Journal:  EMBO J       Date:  2010-09-10       Impact factor: 11.598

Review 3.  DNA methylation and histone modifications induced by abiotic stressors in plants.

Authors:  Karolina Czajka; Melanie Mehes-Smith; Kabwe Nkongolo
Journal:  Genes Genomics       Date:  2021-11-27       Impact factor: 1.839

4.  Protocol: fine-tuning of a Chromatin Immunoprecipitation (ChIP) protocol in tomato.

Authors:  Martiniano M Ricardi; Rodrigo M González; Norberto D Iusem
Journal:  Plant Methods       Date:  2010-04-09       Impact factor: 4.993

5.  Endosperm-specific hypomethylation, and meiotic inheritance and variation of DNA methylation level and pattern in sorghum (Sorghum bicolor L.) inter-strain hybrids.

Authors:  M S Zhang; H Y Yan; N Zhao; X Y Lin; J S Pang; K Z Xu; L X Liu; B Liu
Journal:  Theor Appl Genet       Date:  2007-05-08       Impact factor: 5.699

6.  Heritable Effect of Plant Water Availability Conditions on Restoration of Male Fertility in the "9E" CMS-Inducing Cytoplasm of Sorghum.

Authors:  L A Elkonin; M I Tsvetova
Journal:  Front Plant Sci       Date:  2012-05-11       Impact factor: 5.753

7.  A hypomethylated population of Brassica rapa for forward and reverse epi-genetics.

Authors:  Stephen Amoah; Smita Kurup; Carlos Marcelino Rodriguez Lopez; Sue J Welham; Stephen J Powers; Clare J Hopkins; Michael J Wilkinson; Graham J King
Journal:  BMC Plant Biol       Date:  2012-10-20       Impact factor: 4.215

8.  Epigenetic mechanisms of genomic imprinting: common themes in the regulation of imprinted regions in mammals, plants, and insects.

Authors:  William A Macdonald
Journal:  Genet Res Int       Date:  2012-02-15

9.  Meiotically stable natural epialleles of Sadhu, a novel Arabidopsis retroposon.

Authors:  Sanjida H Rangwala; Rangasamy Elumalai; Cheryl Vanier; Hakan Ozkan; David W Galbraith; Eric J Richards
Journal:  PLoS Genet       Date:  2006-03-17       Impact factor: 5.917

10.  Genetic subtraction profiling identifies genes essential for Arabidopsis reproduction and reveals interaction between the female gametophyte and the maternal sporophyte.

Authors:  Amal J Johnston; Patrick Meier; Jacqueline Gheyselinck; Samuel Ej Wuest; Michael Federer; Edith Schlagenhauf; Jörg D Becker; Ueli Grossniklaus
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

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