Literature DB >> 16249264

ISER: selection of differentially expressed genes from DNA array data by non-linear data transformations and local fitting.

R D Drummond1, A Pinheiro, C S Rocha, M Menossi.   

Abstract

SUMMARY: This report describes an algorithm (intensity-dependent selection of expression ratios or ISER) developed to analyse DNA array data by optimizing the selection of genes with the most significant variations in expression amongst two RNA samples. The algorithm is designed for use when little or no replication of array hybridizations is available.

Mesh：

Year:  2005        PMID： 16249264     DOI： 10.1093/bioinformatics/bti729

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


  4 in total

1.  Analysis of chemotherapy response programs in ovarian cancers by the next-generation sequencing technologies.

Authors:  Lihua Cheng; Wei Lu; Bhushan Kulkarni; Tanja Pejovic; Xiaowei Yan; Jung-Hsien Chiang; Leroy Hood; Kunle Odunsi; Biaoyang Lin
Journal:  Gynecol Oncol       Date:  2010-02-23       Impact factor: 5.482

2.  Identification of new ABA- and MEJA-activated sugarcane bZIP genes by data mining in the SUCEST database.

Authors:  Paulo Sérgio Schlögl; Fábio Tebaldi S Nogueira; Rodrigo Drummond; Juliana M Felix; Vicente E De Rosa; Renato Vicentini; Adilson Leite; Eugênio C Ulian; Marcelo Menossi
Journal:  Plant Cell Rep       Date:  2007-10-30       Impact factor: 4.570

3.  Identification of genes responsive to the application of ethanol on sugarcane leaves.

Authors:  Sandra R Camargo; Geraldo M A Cançado; Eugênio C Ulian; Marcelo Menossi
Journal:  Plant Cell Rep       Date:  2007-08-16       Impact factor: 4.570

4.  Sugarcane Serine Peptidase Inhibitors, Serine Peptidases, and Clp Protease System Subunits Associated with Sugarcane Borer (Diatraea saccharalis) Herbivory and Wounding.

Authors:  Ane H Medeiros; Fabiana B Mingossi; Renata O Dias; Flávia P Franco; Renato Vicentini; Marcia O Mello; Daniel S Moura; Marcio C Silva-Filho
Journal:  Int J Mol Sci       Date:  2016-09-01       Impact factor: 5.923
  4 in total

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