Literature DB >> 16248031

Relative stability of quadruplexes containing different number of G-tetrads.

Luigi Petraccone1, Eva Erra, Ida Duro, Veronica Esposito, Antonio Randazzo, Luciano Mayol, Carlo Andrea Mattia, Guido Barone, Concetta Giancola.   

Abstract

The aim of this work is to compare the physicochemical properties of three oligonucleotidic sequences, d(TGGGT), d(TGGGGT) and d(TGGGGGT), which assemble to form quadruplex structures with the same molecularity, but containing three, four, and five G-quartets, respectively. The addition of one or two G-tetrads greatly increases both the enthalpy and Tm values of the quadruplex dissociation.

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Year:  2005        PMID: 16248031     DOI: 10.1081/ncn-200060080

Source DB:  PubMed          Journal:  Nucleosides Nucleotides Nucleic Acids        ISSN: 1525-7770            Impact factor:   1.381


  6 in total

1.  Fragile X mental retardation protein interactions with a G quadruplex structure in the 3'-untranslated region of NR2B mRNA.

Authors:  Snezana Stefanovic; Brett A DeMarco; Ayana Underwood; Kathryn R Williams; Gary J Bassell; Mihaela Rita Mihailescu
Journal:  Mol Biosyst       Date:  2015-12

2.  QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences.

Authors:  Oleg Kikin; Lawrence D'Antonio; Paramjeet S Bagga
Journal:  Nucleic Acids Res       Date:  2006-07-01       Impact factor: 16.971

3.  Association of G-quadruplex forming sequences with human mtDNA deletion breakpoints.

Authors:  Dawei W Dong; Filipe Pereira; Steven P Barrett; Jill E Kolesar; Kajia Cao; Joana Damas; Liliya A Yatsunyk; F Brad Johnson; Brett A Kaufman
Journal:  BMC Genomics       Date:  2014-08-13       Impact factor: 3.969

4.  MtDNA sequence features associated with 'selfish genomes' predict tissue-specific segregation and reversion.

Authors:  Ellen C Røyrvik; Iain G Johnston
Journal:  Nucleic Acids Res       Date:  2020-09-04       Impact factor: 16.971

5.  CNBP controls transcription by unfolding DNA G-quadruplex structures.

Authors:  Aldana P David; Angélique Pipier; Federico Pascutti; Andrés Binolfi; Andrea M J Weiner; Emilse Challier; Sofía Heckel; Patrick Calsou; Dennis Gomez; Nora B Calcaterra; Pablo Armas
Journal:  Nucleic Acids Res       Date:  2019-09-05       Impact factor: 16.971

6.  Intra-locked G-quadruplex structures formed by irregular DNA G-rich motifs.

Authors:  Arijit Maity; Fernaldo Richtia Winnerdy; Weili Denyse Chang; Gang Chen; Anh Tuân Phan
Journal:  Nucleic Acids Res       Date:  2020-04-06       Impact factor: 16.971

  6 in total

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