Literature DB >> 16247703

Advent of a new retrotransposon structure: the long form of the Veju elements.

François Sabot1, Pierre Sourdille, Michel Bernard.   

Abstract

Transposable elements are the main component of plant genomes, especially in grass species. In a previous analysis, we have identified two unusual types of Class I elements, two homologous Veju TRIM elements, but with an unusual long structure. They are formed by the junction of a yet unidentified segment labelled unknown DNA, flanked by the borders of the classical Veju element. Here, we show that the long (Veju_L) and the short forms (Veju_S) coexist within wheat genomes. The associated unknown DNA had always the same origin, and the Veju_L came probably from either illegitimate recombinations or 'template switching' between the Veju_S and another unique unknown DNA sequence. This junction then evolved differently within wheat genomes.

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Year:  2005        PMID: 16247703     DOI: 10.1007/s10709-005-7926-3

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  6 in total

1.  Genetic and epigenetic dynamics of a retrotransposon after allopolyploidization of wheat.

Authors:  Zina Kraitshtein; Beery Yaakov; Vadim Khasdan; Khalil Kashkush
Journal:  Genetics       Date:  2010-09-07       Impact factor: 4.562

Review 2.  Analysis of plant diversity with retrotransposon-based molecular markers.

Authors:  R Kalendar; A J Flavell; T H N Ellis; T Sjakste; C Moisy; A H Schulman
Journal:  Heredity (Edinb)       Date:  2010-08-04       Impact factor: 3.821

3.  Structure and extent of DNA methylation-based epigenetic variation in wild emmer wheat (T. turgidum ssp. dicoccoides) populations.

Authors:  Anna Venetsky; Adva Levy-Zamir; Vadim Khasdan; Katherine Domb; Khalil Kashkush
Journal:  BMC Plant Biol       Date:  2015-08-14       Impact factor: 4.215

4.  Template switching can create complex LTR retrotransposon insertions in Triticeae genomes.

Authors:  François Sabot; Alan H Schulman
Journal:  BMC Genomics       Date:  2007-07-24       Impact factor: 3.969

5.  Sequence variations of the partially dominant DELLA gene Rht-B1c in wheat and their functional impacts.

Authors:  Wen Wen; Qingyan Deng; Haiyan Jia; Lingzhu Wei; Jingbo Wei; Hongshen Wan; Liming Yang; Wenjin Cao; Zhengqiang Ma
Journal:  J Exp Bot       Date:  2013-08       Impact factor: 6.992

6.  Comparative Study of Pine Reference Genomes Reveals Transposable Element Interconnected Gene Networks.

Authors:  Angelika Voronova; Martha Rendón-Anaya; Pär Ingvarsson; Ruslan Kalendar; Dainis Ruņģis
Journal:  Genes (Basel)       Date:  2020-10-16       Impact factor: 4.096

  6 in total

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