Literature DB >> 16242989

snRNAs as the catalysts of pre-mRNA splicing.

Saba Valadkhan1.   

Abstract

The spliceosome, the gigantic molecular machine that performs pre-mRNA splicing in eukaryotes, contains over 200 different proteins and five RNA molecules. The central role played by the spliceosomal RNAs in splicing has led to the hypothesis that, like the ribosome, the spliceosome is an RNA-centric enzyme and a relic from the RNA world. Recent structural studies have provided the first glimpses of the structural features of spliceosomal RNAs, and mutational analyses in vivo and in vitro have uncovered new functional roles for a catalytically essential domain. An emerging model for the active site of group II introns, a closely related class of natural ribozymes, is likely to provide a wealth of insights on structure and function of the active site of the spliceosome.

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Year:  2005        PMID: 16242989     DOI: 10.1016/j.cbpa.2005.10.008

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  53 in total

1.  Genomic organization and comparative chromosome mapping of the U1 snRNA gene in cichlid fish, with an emphasis in Oreochromis niloticus.

Authors:  D C Cabral-de-Mello; G T Valente; R T Nakajima; C Martins
Journal:  Chromosome Res       Date:  2012-01-11       Impact factor: 5.239

2.  The EF-G-like GTPase Snu114p regulates spliceosome dynamics mediated by Brr2p, a DExD/H box ATPase.

Authors:  Eliza C Small; Stephanie R Leggett; Adrienne A Winans; Jonathan P Staley
Journal:  Mol Cell       Date:  2006-08-04       Impact factor: 17.970

Review 3.  Treasure hunt in an amoeba: non-coding RNAs in Dictyostelium discoideum.

Authors:  Andrea Hinas; Fredrik Söderbom
Journal:  Curr Genet       Date:  2007-03       Impact factor: 3.886

4.  Gene and genon concept: coding versus regulation. A conceptual and information-theoretic analysis of genetic storage and expression in the light of modern molecular biology.

Authors:  Klaus Scherrer; Jürgen Jost
Journal:  Theory Biosci       Date:  2007-09-22       Impact factor: 1.919

5.  Ntr1 activates the Prp43 helicase to trigger release of lariat-intron from the spliceosome.

Authors:  Naoko Tanaka; Anna Aronova; Beate Schwer
Journal:  Genes Dev       Date:  2007-09-15       Impact factor: 11.361

6.  Evolution of spliceosomal snRNA genes in metazoan animals.

Authors:  Manuela Marz; Toralf Kirsten; Peter F Stadler
Journal:  J Mol Evol       Date:  2008-12       Impact factor: 2.395

7.  Low selection pressure aids the evolution of cooperative ribozyme mutations in cells.

Authors:  Zhaleh N Amini; Ulrich F Müller
Journal:  J Biol Chem       Date:  2013-10-02       Impact factor: 5.157

8.  Involvement of the spliceosomal U4 small nuclear RNA in heterochromatic gene silencing at fission yeast centromeres.

Authors:  Madoka Chinen; Misato Morita; Kazuhiro Fukumura; Tokio Tani
Journal:  J Biol Chem       Date:  2009-12-14       Impact factor: 5.157

9.  CUGBP2 directly interacts with U2 17S snRNP components and promotes U2 snRNA binding to cardiac troponin T pre-mRNA.

Authors:  Young-Hwa Goo; Thomas A Cooper
Journal:  Nucleic Acids Res       Date:  2009-05-14       Impact factor: 16.971

10.  Improved Model for Predicting the Free Energy Contribution of Dinucleotide Bulges to RNA Duplex Stability.

Authors:  Jeremy C Tomcho; Magdalena R Tillman; Brent M Znosko
Journal:  Biochemistry       Date:  2015-08-19       Impact factor: 3.162

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