Literature DB >> 16237218

A multiplex polymerase chain reaction microarray assay to detect bioterror pathogens in blood.

Keiko Tomioka1, Michael Peredelchuk, Xiangyang Zhu, Roberto Arena, Dmitri Volokhov, Angamuthu Selvapandiyan, Katie Stabler, Jenny Mellquist-Riemenschneider, Vladimir Chizhikov, Gerardo Kaplan, Hira Nakhasi, Robert Duncan.   

Abstract

Heightened concern about the dangers of bioterrorism requires that measures be developed to ensure the safety of the blood supply. Multiplex detection of such agents using a blood-screening DNA microarray is a sensitive and specific method to screen simultaneously for a number of suspected agents. We have developed and optimized a multiplex polymerase chain reaction microarray assay to screen blood for three potential bioterror bacterial pathogens and a human ribosomal RNA gene internal control. The analytical sensitivity of the assay was demonstrated to be 50 colony-forming units/ml for Bacillus anthracis, Francisella tularensis, and Yersinia pseudotuberculosis (surrogate for Yersinia pestis). The absence of any false-positives demonstrated high analytical specificity. Screening B. anthracis-infected mouse blood samples and uninfected controls demonstrated effectiveness and specificity in a preclinical application. This study represents proof of the concept of microarray technology to screen simultaneously for multiple bioterror pathogens in blood samples.

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Year:  2005        PMID: 16237218      PMCID: PMC1888491          DOI: 10.1016/S1525-1578(10)60579-X

Source DB:  PubMed          Journal:  J Mol Diagn        ISSN: 1525-1578            Impact factor:   5.568


  22 in total

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3.  Bioterrorism: a clear and present danger.

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Authors:  K Sen; D M Asher
Journal:  Transfusion       Date:  2001-11       Impact factor: 3.157

5.  A novel semiquantitative fluorescence-based multiplex polymerase chain reaction assay for rapid simultaneous detection of bacterial and parasitic pathogens from blood.

Authors:  Angamuthu Selvapandiyan; Katie Stabler; Nasim A Ansari; Stephen Kerby; Jenny Riemenschneider; Poonam Salotra; Robert Duncan; Hira L Nakhasi
Journal:  J Mol Diagn       Date:  2005-05       Impact factor: 5.568

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8.  Live vaccine strain of Francisella tularensis: infection and immunity in mice.

Authors:  A H Fortier; M V Slayter; R Ziemba; M S Meltzer; C A Nacy
Journal:  Infect Immun       Date:  1991-09       Impact factor: 3.441

9.  Multiplex polymerase chain reaction for human herpesvirus-6, human cytomegalovirus, and human beta-globin DNA.

Authors:  L M McElhinney; R J Cooper; D J Morris
Journal:  J Virol Methods       Date:  1995-06       Impact factor: 2.014

10.  Evaluation and validation of a real-time polymerase chain reaction assay for rapid identification of Bacillus anthracis.

Authors:  Alex R Hoffmaster; Richard F Meyer; Michael D Bowen; Chung K Marston; Robbin S Weyant; Kathy Thurman; Sharon L Messenger; Erin E Minor; Jonas M Winchell; Max V Rassmussen; Bruce R Newton; J Todd Parker; William E Morrill; Nancy McKinney; Gwen A Barnett; James J Sejvar; John A Jernigan; Bradley A Perkins; Tanja Popovic
Journal:  Emerg Infect Dis       Date:  2002-10       Impact factor: 6.883

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  11 in total

1.  Multiplexed identification of blood-borne bacterial pathogens by use of a novel 16S rRNA gene PCR-ligase detection reaction-capillary electrophoresis assay.

Authors:  Maneesh R Pingle; Kathleen Granger; Philip Feinberg; Rebecca Shatsky; Bram Sterling; Mark Rundell; Eric Spitzer; Davise Larone; Linnie Golightly; Francis Barany
Journal:  J Clin Microbiol       Date:  2007-04-11       Impact factor: 5.948

2.  Comparison of multiplex PCR hybridization-based and singleplex real-time PCR-based assays for detection of low prevalence pathogens in spiked samples.

Authors:  Donna Hockman; Ming Dong; Hong Zheng; Sanjai Kumar; Matthew D Huff; Elena Grigorenko; Maureen Beanan; Robert Duncan
Journal:  J Microbiol Methods       Date:  2016-11-09       Impact factor: 2.363

3.  Customizable PCR-microplate array for differential identification of multiple pathogens.

Authors:  Abdela Woubit; Teshome Yehualaeshet; Sherrelle Roberts; Martha Graham; Moonil Kim; Temesgen Samuel
Journal:  J Food Prot       Date:  2013-11       Impact factor: 2.077

4.  Reverse line blot macroarray for simultaneous detection and characterization of four biological warfare agents.

Authors:  Kulanthaivel Thavachelvam; Urmil Tuteja; Kumari Sarika; Suryanarayana Nagendra; Subodh Kumar
Journal:  Indian J Microbiol       Date:  2012-11-06       Impact factor: 2.461

5.  Rapid focused sequencing: a multiplexed assay for simultaneous detection and strain typing of Bacillus anthracis, Francisella tularensis, and Yersinia pestis.

Authors:  Rosemary S Turingan; Hans-Ulrich Thomann; Anna Zolotova; Eugene Tan; Richard F Selden
Journal:  PLoS One       Date:  2013-02-13       Impact factor: 3.240

6.  Reliable detection of Bacillus anthracis, Francisella tularensis and Yersinia pestis by using multiplex qPCR including internal controls for nucleic acid extraction and amplification.

Authors:  Ingmar Janse; Raditijo A Hamidjaja; Jasper M Bok; Bart J van Rotterdam
Journal:  BMC Microbiol       Date:  2010-12-08       Impact factor: 3.605

Review 7.  Detection of blood-transmissible agents: can screening be miniaturized?

Authors:  Chantal Fournier-Wirth; Nicole Jaffrezic-Renault; Joliette Coste
Journal:  Transfusion       Date:  2010-09       Impact factor: 3.157

8.  A New Generation Microarray for the Simultaneous Detection and Identification of Yersinia pestis and Bacillus anthracis in Food.

Authors:  Noriko Goji; Trevor Macmillan; Kingsley Kwaku Amoako
Journal:  J Pathog       Date:  2012-10-18

9.  Large scale multiplex PCR improves pathogen detection by DNA microarrays.

Authors:  Maria Palka-Santini; Berit E Cleven; Ludwig Eichinger; Martin Krönke; Oleg Krut
Journal:  BMC Microbiol       Date:  2009-01-03       Impact factor: 3.605

10.  [Microbiological diagnosis: Etiologic driven and syndrome driven].

Authors:  F Gouriet; D Raoult
Journal:  Antibiotiques (Paris)       Date:  2008-11-29
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