Literature DB >> 16235024

Polaribacter butkevichii sp. nov., a novel marine mesophilic bacterium of the family Flavobacteriaceae.

Olga I Nedashkovskaya1, Seung Bum Kim, Anatoly M Lysenko, Nataliya I Kalinovskaya, Valery V Mikhailov, In Seop Kim, Kyung Sook Bae.   

Abstract

A novel heterotrophic, yellow pigmented, aerobic, Gram-negative, nonmotile, oxidase- and catalase-positive bacterium KMM 3,938(T) was isolated from sea water collected in the Sea of Japan, Russia. The strain grew at mesophilic temperature range, and required the presence of NaCl for growth. 16S rRNA gene sequence analysis revealed that strain KMM 3,938(T) is a member of the family Flavobacteriaceae. The predominant fatty acids were C13:0 iso, C14:0 iso, C15:0 iso, C15:0, C15:1Delta6, 3OH-C15:0:3 iso, and 3OH-C15:0. The G + C content of the DNA of KMM 3938(T) was 32.4 mol%. On the basis of phenotypic, chemotaxonomic, genotypic, and phylogenetic characteristics, the novel bacterium was assigned to the genus Polaribacter as Polaribacter butkevichii sp. nov. The type strain is KMM 3938(T )(= KCTC 12100(T) = CCUG 48005(T)).

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Year:  2005        PMID: 16235024     DOI: 10.1007/s00284-005-0105-z

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.343


  9 in total

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Journal:  Annu Rev Microbiol       Date:  1999       Impact factor: 15.500

2.  Reichenbachia agariperforans gen. nov., sp. nov., a novel marine bacterium in the phylum Cytophaga-Flavobacterium-Bacteroides.

Authors:  Olga I Nedashkovskaya; Makoto Suzuki; Mikhail V Vysotskii; Valery V Mikhailov
Journal:  Int J Syst Evol Microbiol       Date:  2003-01       Impact factor: 2.747

3.  Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature.

Authors:  J MARMUR; P DOTY
Journal:  J Mol Biol       Date:  1962-07       Impact factor: 5.469

4.  Modified medium for the oxidation-fermentation test in the identification of marine bacteria.

Authors:  M L Lemos; A E Toranzo; J L Barja
Journal:  Appl Environ Microbiol       Date:  1985-06       Impact factor: 4.792

5.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

6.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

7.  Polaribacter gen. nov., with three new species, P. irgensii sp. nov., P. franzmannii sp. nov. and P. filamentus sp. nov., gas vacuolate polar marine bacteria of the Cytophaga-Flavobacterium-Bacteroides group and reclassification of 'Flectobacillus glomeratus' as Polaribacter glomeratus comb. nov.

Authors:  J J Gosink; C R Woese; J T Staley
Journal:  Int J Syst Bacteriol       Date:  1998-01

8.  Streptomyces thermocarboxydovorans sp. nov. and Streptomyces thermocarboxydus sp. nov., two moderately thermophilic carboxydotrophic species from soil.

Authors:  S B Kim; C Falconer; E Williams; M Goodfellow
Journal:  Int J Syst Bacteriol       Date:  1998-01

9.  Description of Cellulophaga algicola sp. nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov.

Authors:  J P Bowman
Journal:  Int J Syst Evol Microbiol       Date:  2000-09       Impact factor: 2.747

  9 in total
  7 in total

1.  Polaribacter reichenbachii sp. nov.: a new marine bacterium associated with the green alga Ulva fenestrata.

Authors:  Olga I Nedashkovskaya; Andrey D Kukhlevskiy; Natalia V Zhukova
Journal:  Curr Microbiol       Date:  2012-09-28       Impact factor: 2.188

2.  Niches of two polysaccharide-degrading Polaribacter isolates from the North Sea during a spring diatom bloom.

Authors:  Peng Xing; Richard L Hahnke; Frank Unfried; Stephanie Markert; Sixing Huang; Tristan Barbeyron; Jens Harder; Dörte Becher; Thomas Schweder; Frank Oliver Glöckner; Rudolf I Amann; Hanno Teeling
Journal:  ISME J       Date:  2014-12-05       Impact factor: 10.302

3.  Genome characteristics of the proteorhodopsin-containing marine flavobacterium Polaribacter dokdonensis DSW-5.

Authors:  Kiyoung Yoon; Ju Yeon Song; Min-Jung Kwak; Soon-Kyeong Kwon; Jihyun F Kim
Journal:  J Microbiol       Date:  2017-04-22       Impact factor: 3.422

4.  Biodiversity of prokaryotic communities associated with the ectoderm of Ectopleura crocea (Cnidaria, Hydrozoa).

Authors:  Cristina Gioia Di Camillo; Gian Marco Luna; Marzia Bo; Giuseppe Giordano; Cinzia Corinaldesi; Giorgio Bavestrello
Journal:  PLoS One       Date:  2012-06-29       Impact factor: 3.240

5.  American Lobsters (Homarus Americanus) not Surviving During Air Transport: Evaluation of Microbial Spoilage.

Authors:  Erica Tirloni; Simone Stella; Mario Gennari; Fabio Colombo; Cristian Bernardi
Journal:  Ital J Food Saf       Date:  2016-05-02

6.  Haemolymph microbiome of the cultured spiny lobster Panulirus ornatus at different temperatures.

Authors:  Mei C Ooi; Evan F Goulden; Gregory G Smith; Andrew R Bridle
Journal:  Sci Rep       Date:  2019-02-08       Impact factor: 4.379

7.  Metagenome-assembled genomes uncover a global brackish microbiome.

Authors:  Luisa W Hugerth; John Larsson; Johannes Alneberg; Markus V Lindh; Catherine Legrand; Jarone Pinhassi; Anders F Andersson
Journal:  Genome Biol       Date:  2015-12-14       Impact factor: 13.583

  7 in total

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