Literature DB >> 16234940

The nature and function of the catalytic centres of the DMSO reductases.

Jonathan P McNamara1, Ian H Hillier, Tarnjeet S Bhachu, C David Garner.   

Abstract

Density functional theory calculations have been performed to probe aspects of the function of the reaction centres of the DMSO reductase enzymes, in respect of catalysis of oxygen atom transfer (OAT). The first comparison between Mo and W at the active site of these enzymes has been accomplished by a consideration of the reaction profile for OAT from DMSO to [MoIV(OMe)(S2C2H2)2]1- versus that for the corresponding reaction with [WIV(OMe)(S2C2H2)2]1-. Both reaction profiles involve two transition states separated by a well-defined intermediate; however, whilst the second transition state (TS2) is clearly rate-limiting for the Mo system, the two transition states have a similar energy for the W system. The activation energy for OAT from DMSO to [WIV(OMe)(S2C2H2)2]1- is ca. 23 kJ mol-1 lower for the corresponding reaction with Mo, consistent with the significantly faster rate of reduction of DMSO by Rhodobacter capsulatus W-DMSO reductase than by its Mo counterpart. Consistent with the principle of the entatic state, the geometrical constraints imposed by the protein on the metal centre of the Mo- and W-DMSO reductases facilitate OAT by favouring a trigonal prismatic geometry for the transition state TS2 that is close to that observed for the metal in the oxidised form of each of these enzymes. The effects of different tautomers of a simplified form of the pyran ring-opened, dihydropterin state of the molybdopterin cofactor on the reaction profile for OAT have been considered. The major effect, a significant lowering of the activation barrier associated with TS2, is observed for a protonated form of a tautomer that involves conjugation between the pyrazine and metallodithiolene rings.

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Year:  2005        PMID: 16234940     DOI: 10.1039/b507206a

Source DB:  PubMed          Journal:  Dalton Trans        ISSN: 1477-9226            Impact factor:   4.390


  5 in total

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Authors:  Rong-Zhen Liao
Journal:  J Biol Inorg Chem       Date:  2012-11-25       Impact factor: 3.358

2.  Substrate and metal control of barrier heights for oxo transfer to Mo and W bis-dithiolene sites.

Authors:  Adam L Tenderholt; Keith O Hodgson; Britt Hedman; Richard H Holm; Edward I Solomon
Journal:  Inorg Chem       Date:  2012-02-28       Impact factor: 5.165

3.  Sulfur K-edge X-ray absorption spectroscopy and density functional calculations on Mo(IV) and Mo(VI)=O bis-dithiolenes: insights into the mechanism of oxo transfer in DMSO reductase and related functional analogues.

Authors:  Adam L Tenderholt; Jun-Jieh Wang; Robert K Szilagyi; Richard H Holm; Keith O Hodgson; Britt Hedman; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2010-06-23       Impact factor: 15.419

4.  Molybdenum and Tungsten Cofactors and the Reactions They Catalyze.

Authors:  Martin L Kirk; Khadanand Kc
Journal:  Met Ions Life Sci       Date:  2020-03-23

5.  Which functional groups of the molybdopterin ligand should be considered when modeling the active sites of the molybdenum and tungsten cofactors? A density functional theory study.

Authors:  Ulf Ryde; Carola Schulzke; Kerstin Starke
Journal:  J Biol Inorg Chem       Date:  2009-05-29       Impact factor: 3.358

  5 in total

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