Literature DB >> 16233515

Role of two alpha-L-arabinofuranosidases in arabinoxylan degradation and characteristics of the encoding genes from shochu koji molds, Aspergillus kawachii and Aspergillus awamori.

Takuya Koseki1, Masaki Okuda, Shigetoshi Sudoh, Yasuzo Kizaki, Kimio Iwano, Isao Aramaki, Hiroshi Matsuzawa.   

Abstract

Two different alpha-L-arabinofuranosidases from Aspergillus kawachii were purified and characterized. The two enzymes acted synergically with xylanase in the degradation of arabinoxylan and resulted in an increase in the amount of ferulic acid release by feruloyl esterase. Both enzymes were acidophilic and acid stable enzymes which had an optimum pH of 4.0 and were stable at pH 3.0-7.0. The general properties of the enzymes including pH optima and pH stability were similar to those of Aspergillus awamori. These results suggest that the alpha-L-arabinofuranosidases contribute to an increase in cereal utilization and formation of aroma in shochu brewing. Two different genes encoding alpha-L-arabinofuranosidases from A. kawachii, designated as AkabfA and AkabjB, and those from A. awamori, designated as AwabfA and AwabjB, were also cloned and characterized. The difference between the sequences of AkabfA and AwabfA was only one nucleotide, resulting in an amino acid difference in the sequence, and the enzymes were assigned to family 51 of glycoside hydrolases. On the other hand, the differences between the sequences of AkabjB and AwabjB and between their encoding proteins were two nucleotides and one amino acid residue, respectively, and the enzymes were assigned to family 54 of glycoside hydrolases. On comparison of the abfA and abjB genes among A. kawachii, A. awamori, and A. niger, the relationship between the two genes for A. kawachii and A. awamori was much closer than those between A. niger and the others. Northern analyses showed that transcription of AkabfB was greater than that of AkabfA in the presence of L-arabitol and L-arabinose, and that transcriptions of both genes were not induced in the presence of sucrose and glucose.

Entities:  

Year:  2003        PMID: 16233515     DOI: 10.1016/s1389-1723(03)80187-1

Source DB:  PubMed          Journal:  J Biosci Bioeng        ISSN: 1347-4421            Impact factor:   2.894


  8 in total

Review 1.  Alpha-L-arabinofuranosidases: the potential applications in biotechnology.

Authors:  Mondher Th Numan; Narayan B Bhosle
Journal:  J Ind Microbiol Biotechnol       Date:  2005-12-30       Impact factor: 3.346

Review 2.  Thermophilic Degradation of Hemicellulose, a Critical Feedstock in the Production of Bioenergy and Other Value-Added Products.

Authors:  Isaac Cann; Gabriel V Pereira; Ahmed M Abdel-Hamid; Heejin Kim; Daniel Wefers; Boniface B Kayang; Tamotsu Kanai; Takaaki Sato; Rafael C Bernardi; Haruyuki Atomi; Roderick I Mackie
Journal:  Appl Environ Microbiol       Date:  2020-03-18       Impact factor: 4.792

3.  The family 42 carbohydrate-binding module of family 54 alpha-L-arabinofuranosidase specifically binds the arabinofuranose side chain of hemicellulose.

Authors:  Akimasa Miyanaga; Takuya Koseki; Yozo Miwa; Yuichiro Mese; Sachiko Nakamura; Atsushi Kuno; Jun Hirabayashi; Hiroshi Matsuzawa; Takayoshi Wakagi; Hirofumi Shoun; Shinya Fushinobu
Journal:  Biochem J       Date:  2006-11-01       Impact factor: 3.857

4.  The xyl-doc gene cluster of Ruminiclostridium cellulolyticum encodes GH43- and GH62-α-l-arabinofuranosidases with complementary modes of action.

Authors:  Mohamed Mroueh; Marion Aruanno; Romain Borne; Pascale de Philip; Henri-Pierre Fierobe; Chantal Tardif; Sandrine Pagès
Journal:  Biotechnol Biofuels       Date:  2019-06-10       Impact factor: 6.040

5.  A GH51 α-L-arabinofuranosidase from Talaromyces leycettanus strain JCM12802 that selectively drives synergistic lignocellulose hydrolysis.

Authors:  Tao Tu; Xiaoli Li; Kun Meng; Yingguo Bai; Yuan Wang; Zhenxing Wang; Bin Yao; Huiying Luo
Journal:  Microb Cell Fact       Date:  2019-08-19       Impact factor: 5.328

6.  Structure of a GH51 α-L-arabinofuranosidase from Meripilus giganteus: conserved substrate recognition from bacteria to fungi.

Authors:  Nicholas G S McGregor; Johan P Turkenburg; Kristian B R Mørkeberg Krogh; Jens Erik Nielsen; Marta Artola; Keith A Stubbs; Herman S Overkleeft; Gideon J Davies
Journal:  Acta Crystallogr D Struct Biol       Date:  2020-10-16       Impact factor: 7.652

7.  A novel fungal metal-dependent α-L-arabinofuranosidase of family 54 glycoside hydrolase shows expanded substrate specificity.

Authors:  Maria Lorenza Leal Motta; Jaire Alves Ferreira Filho; Ricardo Rodrigues de Melo; Leticia Maria Zanphorlin; Clelton Aparecido Dos Santos; Anete Pereira de Souza
Journal:  Sci Rep       Date:  2021-05-26       Impact factor: 4.379

8.  Identification and Characterization of a Novel Galactofuranose-Specific β-D-Galactofuranosidase from Streptomyces Species.

Authors:  Emiko Matsunaga; Yujiro Higuchi; Kazuki Mori; Nao Yairo; Takuji Oka; Saki Shinozuka; Kosuke Tashiro; Minoru Izumi; Satoru Kuhara; Kaoru Takegawa
Journal:  PLoS One       Date:  2015-09-04       Impact factor: 3.240

  8 in total

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