Literature DB >> 16233511

Taxonomy of nonmethanogenic hyperthermophilic and related thermophilic archaea.

Takashi Itoh1.   

Abstract

In view of the continuous increase in the number of described species of nonmethanogenic hyperthermophilic and related thermophilic archaea thriving in geothermally heated habitats (i.e., members of the orders Thermoproteales, Desulfurococcales, Sulfolobales, Thermoplasmatales, Thermococcales and Archaeoglobales), their current taxonomic status and taxonomic properties are reviewed. The introduction of 16S rRNA phylogeny has brought a more reliable taxonomic framework for these archaea, although, their phenotypic properties still remain as salient and descriptive features. Moreover, certain cellular components are potentially applicable to their taxonomic classification.

Year:  2003        PMID: 16233511

Source DB:  PubMed          Journal:  J Biosci Bioeng        ISSN: 1347-4421            Impact factor:   2.894


  13 in total

1.  Distinct physiological roles of the three [NiFe]-hydrogenase orthologs in the hyperthermophilic archaeon Thermococcus kodakarensis.

Authors:  Tamotsu Kanai; Ryoji Matsuoka; Haruki Beppu; Akihito Nakajima; Yoshihiro Okada; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Bacteriol       Date:  2011-04-22       Impact factor: 3.490

2.  Genetic examination and mass balance analysis of pyruvate/amino acid oxidation pathways in the hyperthermophilic archaeon Thermococcus kodakarensis.

Authors:  Kenta Nohara; Izumi Orita; Satoshi Nakamura; Tadayuki Imanaka; Toshiaki Fukui
Journal:  J Bacteriol       Date:  2014-08-25       Impact factor: 3.490

3.  Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes.

Authors:  Toshiaki Fukui; Haruyuki Atomi; Tamotsu Kanai; Rie Matsumi; Shinsuke Fujiwara; Tadayuki Imanaka
Journal:  Genome Res       Date:  2005-02-14       Impact factor: 9.043

4.  Description of Thermococcus kodakaraensis sp. nov., a well studied hyperthermophilic archaeon previously reported as Pyrococcus sp. KOD1.

Authors:  Haruyuki Atomi; Toshiaki Fukui; Tamotsu Kanai; Masaaki Morikawa; Tadayuki Imanaka
Journal:  Archaea       Date:  2004-10       Impact factor: 3.273

5.  Genetic examination of initial amino acid oxidation and glutamate catabolism in the hyperthermophilic archaeon Thermococcus kodakarensis.

Authors:  Yuusuke Yokooji; Takaaki Sato; Shinsuke Fujiwara; Tadayuki Imanaka; Haruyuki Atomi
Journal:  J Bacteriol       Date:  2013-02-22       Impact factor: 3.490

6.  Linkages between mineralogy, fluid chemistry, and microbial communities within hydrothermal chimneys from the Endeavour Segment, Juan de Fuca Ridge.

Authors:  T J Lin; H C Ver Eecke; E A Breves; M D Dyar; J W Jamieson; M D Hannington; H Dahle; J L Bishop; M D Lane; D A Butterfield; D S Kelley; M D Lilley; J A Baross; J F Holden
Journal:  Geochem Geophys Geosyst       Date:  2016-01-11       Impact factor: 3.624

7.  In silico description of cobalt and nickel assimilation systems in the genomes of methanogens.

Authors:  P Chellapandi
Journal:  Syst Synth Biol       Date:  2011-10-15

8.  The complete genome sequence of Thermococcus onnurineus NA1 reveals a mixed heterotrophic and carboxydotrophic metabolism.

Authors:  Hyun Sook Lee; Sung Gyun Kang; Seung Seob Bae; Jae Kyu Lim; Yona Cho; Yun Jae Kim; Jeong Ho Jeon; Sun-Shin Cha; Kae Kyoung Kwon; Hyung-Tae Kim; Cheol-Joo Park; Hee-Wook Lee; Seung Il Kim; Jongsik Chun; Rita R Colwell; Sang-Jin Kim; Jung-Hyun Lee
Journal:  J Bacteriol       Date:  2008-09-12       Impact factor: 3.490

9.  Methionine sulfoxide reductase from the hyperthermophilic archaeon Thermococcus kodakaraensis, an enzyme designed to function at suboptimal growth temperatures.

Authors:  Eiji Fukushima; Yasuhiro Shinka; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Bacteriol       Date:  2007-07-27       Impact factor: 3.490

10.  Characterization of two members among the five ADP-forming acyl coenzyme A (Acyl-CoA) synthetases reveals the presence of a 2-(Imidazol-4-yl)acetyl-CoA synthetase in Thermococcus kodakarensis.

Authors:  Tomotsugu Awano; Anja Wilming; Hiroya Tomita; Yuusuke Yokooji; Toshiaki Fukui; Tadayuki Imanaka; Haruyuki Atomi
Journal:  J Bacteriol       Date:  2013-10-25       Impact factor: 3.490

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