Literature DB >> 16233180

Reduction of protein degradation by use of protease-deficient mutants in cell-free protein synthesis system of Escherichia coli.

Xiuping Jiang1, Kazuyo Oohira, Yugo Iwasaki, Hideo Nakano, Shigeyuki Ichihara, Tsuneo Yamane.   

Abstract

In an Escherichia coli in vitro transcription/translation system, the degradation of produced proteins is often caused by endogenous proteases from E. coli extracts. To reduce the extent of this degradation, several extracts were prepared from E. coli mutants that genetically lacked DegP, OmpT, or Lon proteases. Then, these extracts were used with 14C-leucine in a system for synthesizing single-chain Fv against gp120 (anti-gp120), and phospholipase D (PLD) of Streptomyces antibioticus. The proteins synthesized in vitro were analyzed by sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis (PAGE) and autoradiography. The use of extracts from mutants that were deficient in the structural genes encoding OmpT and Lon markedly repressed the degradation of anti-gp120. Similarly, extracts from degP- and ompT-deleted mutants were able to significantly stabilize in vitro-synthesized PLD, which otherwise disappeared within 30 min. Such protease-deficient mutants were suggested to be useful for preventing the degradation of heterologous proteins in in vitro systems.

Entities:  

Year:  2002        PMID: 16233180     DOI: 10.1263/jbb.93.151

Source DB:  PubMed          Journal:  J Biosci Bioeng        ISSN: 1347-4421            Impact factor:   2.894


  9 in total

1.  Improving cell-free protein synthesis through genome engineering of Escherichia coli lacking release factor 1.

Authors:  Seok Hoon Hong; Yong-Chan Kwon; Rey W Martin; Benjamin J Des Soye; Alexandra M de Paz; Kirsten N Swonger; Ioanna Ntai; Neil L Kelleher; Michael C Jewett
Journal:  Chembiochem       Date:  2015-03-03       Impact factor: 3.164

2.  Recombinant expression and purification of a tumor-targeted toxin in Bacillus anthracis.

Authors:  Christopher Bachran; Suzanne Abdelazim; Rasem J Fattah; Shihui Liu; Stephen H Leppla
Journal:  Biochem Biophys Res Commun       Date:  2012-11-27       Impact factor: 3.575

Review 3.  Engine out of the chassis: cell-free protein synthesis and its uses.

Authors:  Gabriel Rosenblum; Barry S Cooperman
Journal:  FEBS Lett       Date:  2013-10-22       Impact factor: 4.124

4.  Cell-free protein synthesis from genomically recoded bacteria enables multisite incorporation of noncanonical amino acids.

Authors:  Rey W Martin; Benjamin J Des Soye; Yong-Chan Kwon; Jennifer Kay; Roderick G Davis; Paul M Thomas; Natalia I Majewska; Cindy X Chen; Ryan D Marcum; Mary Grace Weiss; Ashleigh E Stoddart; Miriam Amiram; Arnaz K Ranji Charna; Jaymin R Patel; Farren J Isaacs; Neil L Kelleher; Seok Hoon Hong; Michael C Jewett
Journal:  Nat Commun       Date:  2018-03-23       Impact factor: 14.919

5.  Yeast knockout library allows for efficient testing of genomic mutations for cell-free protein synthesis.

Authors:  Jennifer A Schoborg; Lauren G Clark; Alaksh Choudhury; C Eric Hodgman; Michael C Jewett
Journal:  Synth Syst Biotechnol       Date:  2016-04-06

6.  Holistic engineering of cell-free systems through proteome-reprogramming synthetic circuits.

Authors:  Luis E Contreras-Llano; Conary Meyer; Yao Liu; Mridul Sarker; Sierin Lim; Marjorie L Longo; Cheemeng Tan
Journal:  Nat Commun       Date:  2020-06-19       Impact factor: 14.919

7.  Evaluating and mitigating clinical samples matrix effects on TX-TL cell-free performance.

Authors:  Peter L Voyvodic; Ismael Conejero; Khouloud Mesmoudi; Eric Renard; Philippe Courtet; Diego I Cattoni; Jerome Bonnet
Journal:  Sci Rep       Date:  2022-08-12       Impact factor: 4.996

8.  Cell-free protein synthesis from a release factor 1 deficient Escherichia coli activates efficient and multiple site-specific nonstandard amino acid incorporation.

Authors:  Seok Hoon Hong; Ioanna Ntai; Adrian D Haimovich; Neil L Kelleher; Farren J Isaacs; Michael C Jewett
Journal:  ACS Synth Biol       Date:  2014-01-02       Impact factor: 5.110

Review 9.  Preventing unintended proteolysis in plant protein biofactories.

Authors:  Meriem Benchabane; Charles Goulet; Daniel Rivard; Loïc Faye; Véronique Gomord; Dominique Michaud
Journal:  Plant Biotechnol J       Date:  2008-04-28       Impact factor: 9.803

  9 in total

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