Literature DB >> 16231421

Proteomics of organelles and large cellular structures.

John R Yates1, Annalyn Gilchrist, Kathryn E Howell, John J M Bergeron.   

Abstract

The mass-spectrometry-based identification of proteins has created opportunities for the study of organelles, transport intermediates and large subcellular structures. Traditional cell-biology techniques are used to enrich these structures for proteomics analyses, and such analyses provide insights into the biology and functions of these structures. Here, we review the state-of-the-art proteomics techniques for the analysis of subcellular structures and discuss the biological insights that have been derived from such studies.

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Year:  2005        PMID: 16231421     DOI: 10.1038/nrm1711

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  106 in total

Review 1.  Proteomic analysis of the presynaptic active zone.

Authors:  W Volknandt; M Karas
Journal:  Exp Brain Res       Date:  2012-02-22       Impact factor: 1.972

2.  Proteomics profiling of Madin-Darby canine kidney plasma membranes reveals Wnt-5a involvement during oncogenic H-Ras/TGF-beta-mediated epithelial-mesenchymal transition.

Authors:  Yuan-Shou Chen; Rommel A Mathias; Suresh Mathivanan; Eugene A Kapp; Robert L Moritz; Hong-Jian Zhu; Richard J Simpson
Journal:  Mol Cell Proteomics       Date:  2010-05-28       Impact factor: 5.911

3.  Software lock mass by two-dimensional minimization of peptide mass errors.

Authors:  Jürgen Cox; Annette Michalski; Matthias Mann
Journal:  J Am Soc Mass Spectrom       Date:  2011-04-22       Impact factor: 3.109

Review 4.  Secretion and fluid transport mechanisms in the mammary gland: comparisons with the exocrine pancreas and the salivary gland.

Authors:  James L McManaman; Mary E Reyland; Edwin C Thrower
Journal:  J Mammary Gland Biol Neoplasia       Date:  2006-10       Impact factor: 2.673

Review 5.  Subcellular proteomics reveals neuromelanin granules to be a lysosome-related organelle.

Authors:  F Tribl; K Marcus; H E Meyer; G Bringmann; M Gerlach; P Riederer
Journal:  J Neural Transm (Vienna)       Date:  2006-05-05       Impact factor: 3.575

Review 6.  Organellar proteomics: turning inventories into insights.

Authors:  Jens S Andersen; Matthias Mann
Journal:  EMBO Rep       Date:  2006-09       Impact factor: 8.807

7.  Quantification of the synaptosomal proteome of the rat cerebellum during post-natal development.

Authors:  Daniel B McClatchy; Lujian Liao; Sung Kyu Park; John D Venable; John R Yates
Journal:  Genome Res       Date:  2007-08-03       Impact factor: 9.043

Review 8.  Proteomics of Saccharomyces cerevisiae Organelles.

Authors:  Elena Wiederhold; Liesbeth M Veenhoff; Bert Poolman; Dirk Jan Slotboom
Journal:  Mol Cell Proteomics       Date:  2009-12-01       Impact factor: 5.911

9.  Quantitative organellar proteomics analysis of rough endoplasmic reticulum from normal and acute pancreatitis rat pancreas.

Authors:  Xuequn Chen; Maria Dolors Sans; John R Strahler; Alla Karnovsky; Stephen A Ernst; George Michailidis; Philip C Andrews; John A Williams
Journal:  J Proteome Res       Date:  2010-02-05       Impact factor: 4.466

10.  Subnuclear proteomics in colorectal cancer: identification of proteins enriched in the nuclear matrix fraction and regulation in adenoma to carcinoma progression.

Authors:  Jakob Albrethsen; Jaco C Knol; Sander R Piersma; Thang V Pham; Meike de Wit; Sandra Mongera; Beatriz Carvalho; Henk M W Verheul; Remond J A Fijneman; Gerrit A Meijer; Connie R Jimenez
Journal:  Mol Cell Proteomics       Date:  2010-01-20       Impact factor: 5.911

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