Literature DB >> 16230621

The discovery of ubiquitin-dependent proteolysis.

Keith D Wilkinson1.   

Abstract

In early 1980, Irwin A. Rose, Avram Hershko, and Aaron Ciechanover published two papers in PNAS that reported the astounding observation that energy-dependent intracellular proteolysis was far more complicated than the previously accepted models of lysosomal proteolysis or the action of ATP-dependent proteases such as bacterial lon. In fact, it has turned out to be even more complicated than they could have suspected. The general model of covalently attaching a small protein as a targeting signal has proved to be every bit as important to eukaryotic cells as the better understood modifications such as phosphorylation or acetylation. The key player in this modification, a small protein called ubiquitin (APF-1 in these papers), is the founding member of a large family of proteins containing the beta-grasp fold and is used as a posttranslational targeting signal to modify the structure, function, and/or localization of other proteins. The story of this discovery is a textbook example of the confluence of intellectual curiosity, unselfish collaboration, chance, luck, and preparation.

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Year:  2005        PMID: 16230621      PMCID: PMC1266097          DOI: 10.1073/pnas.0504842102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

Review 1.  Regulation of ubiquitin-dependent processes by deubiquitinating enzymes.

Authors:  K D Wilkinson
Journal:  FASEB J       Date:  1997-12       Impact factor: 5.191

2.  Characterization of NEDD8, a developmentally down-regulated ubiquitin-like protein.

Authors:  T Kamitani; K Kito; H P Nguyen; E T Yeh
Journal:  J Biol Chem       Date:  1997-11-07       Impact factor: 5.157

3.  A small ubiquitin-related polypeptide involved in targeting RanGAP1 to nuclear pore complex protein RanBP2.

Authors:  R Mahajan; C Delphin; T Guan; L Gerace; F Melchior
Journal:  Cell       Date:  1997-01-10       Impact factor: 41.582

4.  The neuron-specific protein PGP 9.5 is a ubiquitin carboxyl-terminal hydrolase.

Authors:  K D Wilkinson; K M Lee; S Deshpande; P Duerksen-Hughes; J M Boss; J Pohl
Journal:  Science       Date:  1989-11-03       Impact factor: 47.728

5.  A ubiquitin mutant with specific defects in DNA repair and multiubiquitination.

Authors:  J Spence; S Sadis; A L Haas; D Finley
Journal:  Mol Cell Biol       Date:  1995-03       Impact factor: 4.272

6.  Proposed role of ATP in protein breakdown: conjugation of protein with multiple chains of the polypeptide of ATP-dependent proteolysis.

Authors:  A Hershko; A Ciechanover; H Heller; A L Haas; I A Rose
Journal:  Proc Natl Acad Sci U S A       Date:  1980-04       Impact factor: 11.205

7.  A multiubiquitin chain is confined to specific lysine in a targeted short-lived protein.

Authors:  V Chau; J W Tobias; A Bachmair; D Marriott; D J Ecker; D K Gonda; A Varshavsky
Journal:  Science       Date:  1989-03-24       Impact factor: 47.728

8.  Stress resistance in Saccharomyces cerevisiae is strongly correlated with assembly of a novel type of multiubiquitin chain.

Authors:  T Arnason; M J Ellison
Journal:  Mol Cell Biol       Date:  1994-12       Impact factor: 4.272

9.  Ubiquitin is the ATP-dependent proteolysis factor I of rabbit reticulocytes.

Authors:  K D Wilkinson; M K Urban; A L Haas
Journal:  J Biol Chem       Date:  1980-08-25       Impact factor: 5.157

10.  Ubiquitin-specific proteases of Saccharomyces cerevisiae. Cloning of UBP2 and UBP3, and functional analysis of the UBP gene family.

Authors:  R T Baker; J W Tobias; A Varshavsky
Journal:  J Biol Chem       Date:  1992-11-15       Impact factor: 5.157

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  43 in total

Review 1.  Ubiquitin on the move: the ubiquitin modification system plays diverse roles in the regulation of endoplasmic reticulum- and plasma membrane-localized proteins.

Authors:  Damian D Guerra; Judy Callis
Journal:  Plant Physiol       Date:  2012-06-22       Impact factor: 8.340

2.  The ubiquitination machinery of the ubiquitin system.

Authors:  Judy Callis
Journal:  Arabidopsis Book       Date:  2014-10-06

3.  Nonspecific yet decisive: Ubiquitination can affect the native-state dynamics of the modified protein.

Authors:  Yulian Gavrilov; Tzachi Hagai; Yaakov Levy
Journal:  Protein Sci       Date:  2015-06-09       Impact factor: 6.725

Review 4.  What history tells us XLI. Ubiquitin and proteolysis.

Authors:  Michel Morange
Journal:  J Biosci       Date:  2016-09       Impact factor: 1.826

5.  Ubiquitin Immunostaining in Thyroid Neoplasms Marks True Intranuclear Cytoplasmic Pseudoinclusions and May Help Differentiate Papillary Carcinoma from NIFTP.

Authors:  Vincent Cracolici; Thomas Krausz; Nicole A Cipriani
Journal:  Head Neck Pathol       Date:  2018-03-06

6.  The proteasome as a druggable target with multiple therapeutic potentialities: Cutting and non-cutting edges.

Authors:  G R Tundo; D Sbardella; A M Santoro; A Coletta; F Oddone; G Grasso; D Milardi; P M Lacal; S Marini; R Purrello; G Graziani; M Coletta
Journal:  Pharmacol Ther       Date:  2020-05-19       Impact factor: 12.310

Review 7.  The predator becomes the prey: regulating the ubiquitin system by ubiquitylation and degradation.

Authors:  Allan M Weissman; Nitzan Shabek; Aaron Ciechanover
Journal:  Nat Rev Mol Cell Biol       Date:  2011-08-23       Impact factor: 94.444

8.  Prevalence of Plasmodium falciparum Kelch 13 (PfK13) and Ubiquitin-Specific Protease 1 (pfubp1) Gene Polymorphisms in Returning Travelers from Africa Reported in Eastern China.

Authors:  He Yan; Xiangli Kong; Tao Zhang; Huihui Xiao; Xinyu Feng; Hong Tu; Jun Feng
Journal:  Antimicrob Agents Chemother       Date:  2020-10-20       Impact factor: 5.191

9.  dbPTM 2016: 10-year anniversary of a resource for post-translational modification of proteins.

Authors:  Kai-Yao Huang; Min-Gang Su; Hui-Ju Kao; Yun-Chung Hsieh; Jhih-Hua Jhong; Kuang-Hao Cheng; Hsien-Da Huang; Tzong-Yi Lee
Journal:  Nucleic Acids Res       Date:  2015-11-17       Impact factor: 16.971

10.  The alpha-fetoprotein (AFP) third domain: a search for AFP interaction sites of cell cycle proteins.

Authors:  G J Mizejewski
Journal:  Tumour Biol       Date:  2016-07-22
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