Literature DB >> 16228363

Synechocystis sp. PCC 6803 - a useful tool in the study of the genetics of cyanobacteria.

M Ikeuchi1, S Tabata.   

Abstract

The cyanobacterium Synechocystis sp. PCC 6803 was the first phototrophic organism to be fully sequenced. The genomic sequence has revealed the structure of the genome and its gene constituents (3167 genes), as well as the relative map positions of each gene. The functions of nearly half of the genes has been deduced using similarity searches. The genome sequence has also allowed for the implementation of systematic strategies to study gene function and the mechanisms of gene regulation on a genome-wide level. Two genome databases, CyanoBase and CyanoMutants, have been established and act as a central repository for information on gene structure and gene function, respectively. As a result of the genome sequencing and the establishment of these databases, Synechocystis sp. PCC 6803 provides an extremely versatile and easy model to study the genetic systems of photosynthetic organisms.

Entities:  

Year:  2001        PMID: 16228363     DOI: 10.1023/A:1013887908680

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  52 in total

1.  Phylogeny of 33 ribosomal and six other proteins encoded in an ancient gene cluster that is conserved across prokaryotic genomes: influence of excluding poorly alignable sites from analysis.

Authors:  S Hansmann; W Martin
Journal:  Int J Syst Evol Microbiol       Date:  2000-07       Impact factor: 2.747

2.  Type IV pilus biogenesis and motility in the cyanobacterium Synechocystis sp. PCC6803.

Authors:  D Bhaya; N R Bianco; D Bryant; A Grossman
Journal:  Mol Microbiol       Date:  2000-08       Impact factor: 3.501

3.  Molecular evidence for the early evolution of photosynthesis.

Authors:  J Xiong; W M Fischer; K Inoue; M Nakahara; C E Bauer
Journal:  Science       Date:  2000-09-08       Impact factor: 47.728

4.  Detection of seven major evolutionary lineages in cyanobacteria based on the 16S rRNA gene sequence analysis with new sequences of five marine Synechococcus strains.

Authors:  D Honda; A Yokota; J Sugiyama
Journal:  J Mol Evol       Date:  1999-06       Impact factor: 2.395

5.  CyanoBase, a www database containing the complete nucleotide sequence of the genome of Synechocystis sp. strain PCC6803.

Authors:  Y Nakamura; T Kaneko; M Hirosawa; N Miyajima; S Tabata
Journal:  Nucleic Acids Res       Date:  1998-01-01       Impact factor: 16.971

6.  The complete genome sequence of Escherichia coli K-12.

Authors:  F R Blattner; G Plunkett; C A Bloch; N T Perna; V Burland; M Riley; J Collado-Vides; J D Glasner; C K Rode; G F Mayhew; J Gregor; N W Davis; H A Kirkpatrick; M A Goeden; D J Rose; B Mau; Y Shao
Journal:  Science       Date:  1997-09-05       Impact factor: 47.728

7.  A prokaryotic phytochrome.

Authors:  J Hughes; T Lamparter; F Mittmann; E Hartmann; W Gärtner; A Wilde; T Börner
Journal:  Nature       Date:  1997-04-17       Impact factor: 49.962

8.  Compilation of all genes encoding bacterial two-component signal transducers in the genome of the cyanobacterium, Synechocystis sp. strain PCC 6803.

Authors:  T Mizuno; T Kaneko; S Tabata
Journal:  DNA Res       Date:  1996-12-31       Impact factor: 4.458

9.  Proteomic study of the peripheral proteins from thylakoid membranes of the cyanobacterium Synechocystis sp. PCC 6803.

Authors:  Y Wang; J Sun; P R Chitnis
Journal:  Electrophoresis       Date:  2000-05       Impact factor: 3.535

10.  A gene of Synechocystis sp. Strain PCC 6803 encoding a novel iron transporter.

Authors:  H Katoh; A R Grossman; N Hagino; T Ogawa
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

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  44 in total

1.  Monitoring photosynthesis in individual cells of Synechocystis sp. PCC 6803 on a picosecond timescale.

Authors:  S B Krumova; S P Laptenok; J W Borst; B Ughy; Z Gombos; G Ajlani; H van Amerongen
Journal:  Biophys J       Date:  2010-09-22       Impact factor: 4.033

2.  Identification of a gene essential for protoporphyrinogen IX oxidase activity in the cyanobacterium Synechocystis sp. PCC6803.

Authors:  Kazushige Kato; Ryouichi Tanaka; Shinsuke Sano; Ayumi Tanaka; Hideo Hosaka
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-07       Impact factor: 11.205

3.  Purification and characterization of a hemolysin-like protein, Sll1951, a nontoxic member of the RTX protein family from the Cyanobacterium Synechocystis sp. strain PCC 6803.

Authors:  Tetsushi Sakiyama; Hironori Ueno; Hideya Homma; Osamu Numata; Tomohiko Kuwabara
Journal:  J Bacteriol       Date:  2006-05       Impact factor: 3.490

4.  Phylogenetic analyses of cyanobacterial genomes: quantification of horizontal gene transfer events.

Authors:  Olga Zhaxybayeva; J Peter Gogarten; Robert L Charlebois; W Ford Doolittle; R Thane Papke
Journal:  Genome Res       Date:  2006-08-09       Impact factor: 9.043

5.  Effects of deficiency and overdose of group 2 sigma factors in triple inactivation strains of Synechocystis sp. strain PCC 6803.

Authors:  Maija Pollari; Susanne Rantamäki; Tuomas Huokko; Anna Kårlund-Marttila; Virpi Virjamo; Esa Tyystjärvi; Taina Tyystjärvi
Journal:  J Bacteriol       Date:  2010-10-22       Impact factor: 3.490

6.  Simultaneous inactivation of sigma factors B and D interferes with light acclimation of the cyanobacterium Synechocystis sp. strain PCC 6803.

Authors:  Maija Pollari; Virpi Ruotsalainen; Susanne Rantamäki; Esa Tyystjärvi; Taina Tyystjärvi
Journal:  J Bacteriol       Date:  2009-04-10       Impact factor: 3.490

7.  An Rrf2-type transcriptional regulator is required for expression of psaAB genes in the cyanobacterium Synechocystis sp. PCC 6803.

Authors:  Takafumi Midorikawa; Koji Matsumoto; Rei Narikawa; Masahiko Ikeuchi
Journal:  Plant Physiol       Date:  2009-08-19       Impact factor: 8.340

8.  A pattern analysis of gene conversion literature.

Authors:  Mark J Lawson; Jian Jiao; Weiguo Fan; Liqing Zhang
Journal:  Comp Funct Genomics       Date:  2010-01-31

9.  Axenic Biofilm Formation and Aggregation by Synechocystis sp. Strain PCC 6803 Are Induced by Changes in Nutrient Concentration and Require Cell Surface Structures.

Authors:  Rey Allen; Bruce E Rittmann; Roy Curtiss
Journal:  Appl Environ Microbiol       Date:  2019-03-22       Impact factor: 4.792

10.  A large-scale protein protein interaction analysis in Synechocystis sp. PCC6803.

Authors:  Shusei Sato; Yoshikazu Shimoda; Akiko Muraki; Mitsuyo Kohara; Yasukazu Nakamura; Satoshi Tabata
Journal:  DNA Res       Date:  2007-11-13       Impact factor: 4.458

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