Literature DB >> 16227789

Detection of minor populations of drug-resistant HIV-1 in acute seroconverters.

Karin J Metzner1, Pia Rauch, Hauke Walter, Christoph Boesecke, Bernhard Zöllner, Heiko Jessen, Knud Schewe, Stefan Fenske, Holger Gellermann, Hans-Jürgen Stellbrink.   

Abstract

OBJECTIVE: The transmission of drug-resistant HIV-1 is a major health concern. To date, most clinical studies have relied on sequencing techniques for genotypic analyses which do not allow quantification of minority viral populations below 25%. As minor populations of drug-resistant HIV-1 could impact the efficiency of antiretroviral therapy, this study was performed to determine the prevalence of minor populations of drug-resistant HIV-1 in acute seroconverters. DESIGN AND METHODS: Forty-nine acute seroconverters from two clinical centers in Germany were included in the study. Individuals were identified between June 1999 and March 2003, and none had received antiretroviral therapy prior to sampling. Minor populations of drug-resistant variants were detected by quantitative real-time polymerase chain reaction using allele-discriminating oligonucleotides for three key resistance mutations: L90M (protease), K103N and M184V (reverse transcriptase). The approximate discriminative power was between 0.01 and 0.2%.
RESULTS: Drug-resistant variants were detected in 10 of 49 patients (20.4%). The L90M mutation was found in one of 49 (2%), the K103N mutation in five of 49 (10.2%) and the M184V mutation in six of 49 (12.2%) patients, respectively. In five of the 10 individuals with detectable drug-resistant virus (50%), the detected population represented a minor viral quasi-species (< 25% of viruses) and was not detected by direct sequencing.
CONCLUSIONS: The prevalence of minor populations of drug-resistant HIV-1 in acute seroconverters can be frequently detected and may impact the success of antiretroviral therapy.

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Year:  2005        PMID: 16227789     DOI: 10.1097/01.aids.0000189878.97480.ed

Source DB:  PubMed          Journal:  AIDS        ISSN: 0269-9370            Impact factor:   4.177


  35 in total

1.  Detection of minority resistance during early HIV-1 infection: natural variation and spurious detection rather than transmission and evolution of multiple viral variants.

Authors:  Sara Gianella; Wayne Delport; Mary E Pacold; Jason A Young; Jun Yong Choi; Susan J Little; Douglas D Richman; Sergei L Kosakovsky Pond; Davey M Smith
Journal:  J Virol       Date:  2011-06-01       Impact factor: 5.103

Review 2.  Minority variants of drug-resistant HIV.

Authors:  Sara Gianella; Douglas D Richman
Journal:  J Infect Dis       Date:  2010-09-01       Impact factor: 5.226

3.  MultiCode-RTx real-time PCR system for detection of subpopulations of K65R human immunodeficiency virus type 1 reverse transcriptase mutant viruses in clinical samples.

Authors:  Evguenia S Svarovskaia; Michael J Moser; Andrew S Bae; James R Prudent; Michael D Miller; Katyna Borroto-Esoda
Journal:  J Clin Microbiol       Date:  2006-09-27       Impact factor: 5.948

4.  Systematic evaluation of allele-specific real-time PCR for the detection of minor HIV-1 variants with pol and env resistance mutations.

Authors:  Roger Paredes; Vincent C Marconi; Thomas B Campbell; Daniel R Kuritzkes
Journal:  J Virol Methods       Date:  2007-07-26       Impact factor: 2.014

5.  Simultaneous detection of major drug resistance mutations in the protease and reverse transcriptase genes for HIV-1 subtype C by use of a multiplex allele-specific assay.

Authors:  Guoqing Zhang; Fangping Cai; Zhiyong Zhou; Joshua DeVos; Nick Wagar; Karidia Diallo; Isaac Zulu; Nellie Wadonda-Kabondo; Jeffrey S A Stringer; Paul J Weidle; Clement B Ndongmo; Izukanji Sikazwe; Abdoulaye Sarr; Matthew Kagoli; John Nkengasong; Feng Gao; Chunfu Yang
Journal:  J Clin Microbiol       Date:  2013-08-28       Impact factor: 5.948

6.  Short communication: Simultaneous substitutions of V38M and N43T-N44K in the gp41 heptad repeat 1 (HR1) disrupt HIV type 1 gPr160 endoproteolytic cleavage (*).

Authors:  V A Morozov; A V Morozov; S Lagaye
Journal:  AIDS Res Hum Retroviruses       Date:  2010-01       Impact factor: 2.205

7.  Primer ID Informs Next-Generation Sequencing Platforms and Reveals Preexisting Drug Resistance Mutations in the HIV-1 Reverse Transcriptase Coding Domain.

Authors:  Jessica R Keys; Shuntai Zhou; Jeffrey A Anderson; Joseph J Eron; Lauren A Rackoff; Cassandra Jabara; Ronald Swanstrom
Journal:  AIDS Res Hum Retroviruses       Date:  2015-04-02       Impact factor: 2.205

8.  Low-abundance drug-resistant HIV-1 variants: finding significance in an era of abundant diagnostic and therapeutic options.

Authors:  Robert W Shafer
Journal:  J Infect Dis       Date:  2009-03-01       Impact factor: 5.226

9.  Clinical implications of HIV-1 minority variants.

Authors:  Jonathan Z Li; Daniel R Kuritzkes
Journal:  Clin Infect Dis       Date:  2013-02-27       Impact factor: 9.079

10.  Hidden Empirical Research Ethics: A Review of Three Health Journals from 2005 through 2006.

Authors:  James M Dubois; Rebecca L Volpe; Erica K Rangel
Journal:  J Empir Res Hum Res Ethics       Date:  2008-09       Impact factor: 1.742

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