Literature DB >> 16227303

Sequences intervening between the core packaging determinants are dispensable for maintaining the packaging potential and propagation of feline immunodeficiency virus transfer vector RNAs.

Farah Mustafa1, Akela Ghazawi, Preethi Jayanth, Pretty Susan Phillip, Jahabar Ali, Tahir A Rizvi.   

Abstract

The packaging determinants of feline immunodeficiency virus (FIV) consist of two discontinuous core regions, extending from R to approximately 150 bp of the 5' untranslated region and the first approximately 100 bp of gag. However, the role of sequences intervening between the core regions in packaging has not been clear. A mutational analysis was conducted to determine whether the intervening sequences played a role in FIV RNA packaging, using an in vivo packaging assay complemented with semiquantitative reverse transcriptase PCR. Our analyses reveal that the intervening sequences are dispensable not only for vector RNA packaging but also for propagation, confirming the discontinuous nature of the FIV packaging signal.

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Year:  2005        PMID: 16227303      PMCID: PMC1262595          DOI: 10.1128/JVI.79.21.13817-13821.2005

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  13 in total

1.  The packaging signal of simian immunodeficiency virus is upstream of the major splice donor at a distance from the RNA cap site similar to that of human immunodeficiency virus types 1 and 2.

Authors:  P M Strappe; J Greatorex; J Thomas; P Biswas; E McCann; A M L Lever
Journal:  J Gen Virol       Date:  2003-09       Impact factor: 3.891

2.  Mapping the encapsidation determinants of feline immunodeficiency virus.

Authors:  Iris Kemler; Roman Barraza; Eric M Poeschla
Journal:  J Virol       Date:  2002-12       Impact factor: 5.103

3.  Relative activity of the feline immunodeficiency virus promoter in feline and primate cell lines.

Authors:  Farah Mustafa; Preethi Jayanth; Pretty S Phillip; Akela Ghazawi; Russell D Schmidt; Kathy A Lew; Tahir A Rizvi
Journal:  Microbes Infect       Date:  2005-01-21       Impact factor: 2.700

4.  The human immunodeficiency virus type 1 encapsidation site is a multipartite RNA element composed of functional hairpin structures.

Authors:  M S McBride; A T Panganiban
Journal:  J Virol       Date:  1996-05       Impact factor: 5.103

5.  Secondary structure model of the Mason-Pfizer monkey virus 5' leader sequence: identification of a structural motif common to a variety of retroviruses.

Authors:  G P Harrison; E Hunter; A M Lever
Journal:  J Virol       Date:  1995-04       Impact factor: 5.103

6.  Primate and feline lentivirus vector RNA packaging and propagation by heterologous lentivirus virions.

Authors:  M T Browning; R D Schmidt; K A Lew; T A Rizvi
Journal:  J Virol       Date:  2001-06       Impact factor: 5.103

7.  The critical role of proximal gag sequences in feline immunodeficiency virus genome encapsidation.

Authors:  Iris Kemler; Ishara Azmi; Eric M Poeschla
Journal:  Virology       Date:  2004-09-15       Impact factor: 3.616

8.  Sequences within the gag gene of feline immunodeficiency virus (FIV) are important for efficient RNA encapsidation.

Authors:  Matthew T Browning; Farah Mustafa; Russell D Schmidt; Kathy A Lew; Tahir A Rizvi
Journal:  Virus Res       Date:  2003-06       Impact factor: 3.303

9.  Nucleotide sequence and genomic organization of feline immunodeficiency virus.

Authors:  R L Talbott; E E Sparger; K M Lovelace; W M Fitch; N C Pedersen; P A Luciw; J H Elder
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

10.  Efficient expression of the human papillomavirus type 16 L1 protein in epithelial cells by using Rev and the Rev-responsive element of human immunodeficiency virus or the cis-acting transactivation element of simian retrovirus type 1.

Authors:  W Tan; B K Felber; A S Zolotukhin; G N Pavlakis; S Schwartz
Journal:  J Virol       Date:  1995-09       Impact factor: 5.103

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  15 in total

1.  Mutations in the Basic Region of the Mason-Pfizer Monkey Virus Nucleocapsid Protein Affect Reverse Transcription, Genomic RNA Packaging, and the Virus Assembly Site.

Authors:  Alžběta Dostálková; Filip Kaufman; Ivana Křížová; Anna Kultová; Karolína Strohalmová; Romana Hadravová; Tomáš Ruml; Michaela Rumlová
Journal:  J Virol       Date:  2018-04-27       Impact factor: 5.103

2.  Optimal packaging of FIV genomic RNA depends upon a conserved long-range interaction and a palindromic sequence within gag.

Authors:  Tahir A Rizvi; Julia C Kenyon; Jahabar Ali; Suriya J Aktar; Pretty S Phillip; Akela Ghazawi; Farah Mustafa; Andrew M L Lever
Journal:  J Mol Biol       Date:  2010-08-21       Impact factor: 5.469

Review 3.  The molecular biology of feline immunodeficiency virus (FIV).

Authors:  Julia C Kenyon; Andrew M L Lever
Journal:  Viruses       Date:  2011-11-09       Impact factor: 5.048

4.  SHAPE analysis of the FIV Leader RNA reveals a structural switch potentially controlling viral packaging and genome dimerization.

Authors:  Julia C Kenyon; Sian J Tanner; Michal Legiewicz; Pretty S Phillip; Tahir A Rizvi; Stuart F J Le Grice; Andrew M L Lever
Journal:  Nucleic Acids Res       Date:  2011-05-05       Impact factor: 16.971

5.  Streamlined design of a self-inactivating feline immunodeficiency virus vector for transducing ex vivo dendritic cells and T lymphocytes.

Authors:  Mauro Pistello; Laura Vannucci; Alessia Ravani; Francesca Bonci; Flavia Chiuppesi; Barbara del Santo; Giulia Freer; Mauro Bendinelli
Journal:  Genet Vaccines Ther       Date:  2007-09-19

6.  Structural basis of genomic RNA (gRNA) dimerization and packaging determinants of mouse mammary tumor virus (MMTV).

Authors:  Suriya J Aktar; Valérie Vivet-Boudou; Lizna M Ali; Ayesha Jabeen; Rawan M Kalloush; Delphine Richer; Farah Mustafa; Roland Marquet; Tahir A Rizvi
Journal:  Retrovirology       Date:  2014-11-14       Impact factor: 4.602

7.  The secondary structure of the 5' end of the FIV genome reveals a long-range interaction between R/U5 and gag sequences, and a large, stable stem-loop.

Authors:  Julia C Kenyon; Akela Ghazawi; Winsome K S Cheung; Pretty S Phillip; Tahir A Rizvi; Andrew M L Lever
Journal:  RNA       Date:  2008-10-30       Impact factor: 4.942

8.  Sequences within both the 5' UTR and Gag are required for optimal in vivo packaging and propagation of mouse mammary tumor virus (MMTV) genomic RNA.

Authors:  Farah Mustafa; Dhuha Al Amri; Farah Al Ali; Noor Al Sari; Sarah Al Suwaidi; Preethi Jayanth; Pretty S Philips; Tahir A Rizvi
Journal:  PLoS One       Date:  2012-10-16       Impact factor: 3.240

9.  RNA secondary structure of the feline immunodeficiency virus 5'UTR and Gag coding region.

Authors:  Laurie James; Bruno Sargueil
Journal:  Nucleic Acids Res       Date:  2008-07-14       Impact factor: 16.971

10.  Packaging of Mason-Pfizer monkey virus (MPMV) genomic RNA depends upon conserved long-range interactions (LRIs) between U5 and gag sequences.

Authors:  Rawan M Kalloush; Valérie Vivet-Boudou; Lizna M Ali; Farah Mustafa; Roland Marquet; Tahir A Rizvi
Journal:  RNA       Date:  2016-04-19       Impact factor: 4.942

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