Literature DB >> 16221892

Proteolysis of mitotic chromosomes induces gradual and anisotropic decondensation correlated with a reduction of elastic modulus and structural sensitivity to rarely cutting restriction enzymes.

Lisa H Pope1, Chee Xiong, John F Marko.   

Abstract

The effect of nonspecific proteolysis on the structure of single isolated mitotic newt chromosomes was studied using chromosome elastic response as an assay. Exposure to either trypsin or proteinase K gradually decondensed and softened chromosomes but without entirely eliminating their elastic response. Analysis of chromosome morphology revealed anisotropic decondensation upon digestion, with length increasing more than width. Prolonged protease treatment resulted only in further swelling of the chromosome without complete dissolution. Mild trypsinization induced sensitivity of chromosome elasticity to five- and six-base-specific restriction enzymes. These results, combined with previous studies of effects of nucleases on mitotic chromosome structure, indicate that mild proteolysis gradually reduces the density of chromatin-constraining elements in the mitotic chromosome, providing evidence consistent with an anisotropically folded "chromatin network" model of mitotic chromosome architecture.

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Year:  2005        PMID: 16221892      PMCID: PMC1345650          DOI: 10.1091/mbc.e05-04-0321

Source DB:  PubMed          Journal:  Mol Biol Cell        ISSN: 1059-1524            Impact factor:   4.138


  39 in total

1.  Reversible and irreversible unfolding of mitotic newt chromosomes by applied force.

Authors:  M Poirier; S Eroglu; D Chatenay; J F Marko
Journal:  Mol Biol Cell       Date:  2000-01       Impact factor: 4.138

2.  Action of deoxyribonuclease on lampbrush chromosomes.

Authors:  H G CALLAN; H C MACGREGOR
Journal:  Nature       Date:  1958-05-24       Impact factor: 49.962

3.  Long-range compaction and flexibility of interphase chromatin in budding yeast analyzed by high-resolution imaging techniques.

Authors:  Kerstin Bystricky; Patrick Heun; Lutz Gehlen; Jörg Langowski; Susan M Gasser
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-15       Impact factor: 11.205

4.  An established cell line from the newt Notophthalmus viridescens.

Authors:  D H Reese; T Yamada; R Moret
Journal:  Differentiation       Date:  1976-08-03       Impact factor: 3.880

5.  Elasticity and structure of eukaryote chromosomes studied by micromanipulation and micropipette aspiration.

Authors:  B Houchmandzadeh; J F Marko; D Chatenay; A Libchaber
Journal:  J Cell Biol       Date:  1997-10-06       Impact factor: 10.539

6.  Metaphase chromosome structure: the role of nonhistone proteins.

Authors:  U K Laemmli; S M Cheng; K W Adolph; J R Paulson; J A Brown; W R Baumbach
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1978

7.  Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation.

Authors:  K J Polach; J Widom
Journal:  J Mol Biol       Date:  1995-11-24       Impact factor: 5.469

Review 8.  Biochemical and genetic dissection of mitotic chromosome condensation.

Authors:  T Hirano
Journal:  Trends Biochem Sci       Date:  1995-09       Impact factor: 13.807

9.  The actions of restriction endonucleases on lampbrush chromosomes.

Authors:  D C Gould; H G Callan; C A Thomas
Journal:  J Cell Sci       Date:  1976-07       Impact factor: 5.285

10.  Visualization of early chromosome condensation: a hierarchical folding, axial glue model of chromosome structure.

Authors:  Natashe Kireeva; Margot Lakonishok; Igor Kireev; Tatsuya Hirano; Andrew S Belmont
Journal:  J Cell Biol       Date:  2004-09-07       Impact factor: 10.539

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  16 in total

1.  Nanotribology results show that DNA forms a mechanically resistant 2D network in metaphase chromatin plates.

Authors:  Isaac Gállego; Gerard Oncins; Xavier Sisquella; Xavier Fernàndez-Busquets; Joan-Ramon Daban
Journal:  Biophys J       Date:  2010-12-15       Impact factor: 4.033

Review 2.  Micromechanical studies of mitotic chromosomes.

Authors:  John F Marko
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

3.  Chromosomes Progress to Metaphase in Multiple Discrete Steps via Global Compaction/Expansion Cycles.

Authors:  Zhangyi Liang; Denise Zickler; Mara Prentiss; Frederick S Chang; Guillaume Witz; Kazuhiro Maeshima; Nancy Kleckner
Journal:  Cell       Date:  2015-05-21       Impact factor: 41.582

Review 4.  Condensins: universal organizers of chromosomes with diverse functions.

Authors:  Tatsuya Hirano
Journal:  Genes Dev       Date:  2012-08-01       Impact factor: 11.361

5.  Topoisomerase II mediates meiotic crossover interference.

Authors:  Liangran Zhang; Shunxin Wang; Shen Yin; Soogil Hong; Keun P Kim; Nancy Kleckner
Journal:  Nature       Date:  2014-07-13       Impact factor: 49.962

Review 6.  Towards building a chromosome segregation machine.

Authors:  Kerry Bloom; Ajit Joglekar
Journal:  Nature       Date:  2010-01-28       Impact factor: 49.962

7.  Micromechanics of human mitotic chromosomes.

Authors:  Mingxuan Sun; Ryo Kawamura; John F Marko
Journal:  Phys Biol       Date:  2011-02-07       Impact factor: 2.583

8.  Condensin controls mitotic chromosome stiffness and stability without forming a structurally contiguous scaffold.

Authors:  Mingxuan Sun; Ronald Biggs; Jessica Hornick; John F Marko
Journal:  Chromosome Res       Date:  2018-08-24       Impact factor: 5.239

9.  Mitotic chromosomes are constrained by topoisomerase II-sensitive DNA entanglements.

Authors:  Ryo Kawamura; Lisa H Pope; Morten O Christensen; Mingxuan Sun; Ksenia Terekhova; Fritz Boege; Christian Mielke; Anni H Andersen; John F Marko
Journal:  J Cell Biol       Date:  2010-03-01       Impact factor: 10.539

10.  Dependence of the structure and mechanics of metaphase chromosomes on oxidized cysteines.

Authors:  Adrienne Eastland; Jessica Hornick; Ryo Kawamura; Dhaval Nanavati; John F Marko
Journal:  Chromosome Res       Date:  2016-05-05       Impact factor: 5.239

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