Literature DB >> 16219458

Transposable elements, gene creation and genome rearrangement in flowering plants.

Jeffrey L Bennetzen1.   

Abstract

Plant genome structure is largely derived from the differing specificities, abundances and activities of transposable elements. Recent studies indicate that both the amplification and the removal of transposons are rapid processes in plants, accounting for the general lack of intergenic homology between species that last shared a common ancestor more than 10 million years ago. Two newly discovered transposon varieties, Helitrons and Pack-MULEs, acquire and fuse fragments of plant genes, creating the raw material for the evolution of new genes and new genetic functions. Many of these recently assembled, chimeric gene-candidates are expressed, suggesting that some might escape epigenetic silencing and mutational decay, but a proven case of gene creation by any transposable element activity in plants remains to be demonstrated.

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Year:  2005        PMID: 16219458     DOI: 10.1016/j.gde.2005.09.010

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  139 in total

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Journal:  Chromosome Res       Date:  2011-10       Impact factor: 5.239

2.  Single and multiple CH (calponin homology) domain containing multidomain proteins in Arabidopsis and Saccharomyces: an inventory.

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Journal:  Mol Biol Rep       Date:  2010-03-27       Impact factor: 2.316

3.  Cytology of Vicia species. X. Karyotype evolution and phylogenetic implication in Vicia species of the sections Atossa, Microcarinae, Wiggersia and Vicia.

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Journal:  Protoplasma       Date:  2010-11-06       Impact factor: 3.356

4.  Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor.

Authors:  Ruth A Swanson-Wagner; Steven R Eichten; Sunita Kumari; Peter Tiffin; Joshua C Stein; Doreen Ware; Nathan M Springer
Journal:  Genome Res       Date:  2010-10-29       Impact factor: 9.043

5.  Identification of an active Mutator-like element (MULE) in rice (Oryza sativa).

Authors:  Dongying Gao
Journal:  Mol Genet Genomics       Date:  2012-01-25       Impact factor: 3.291

6.  Cytological visualization of DNA transposons and their transposition pattern in somatic cells of maize.

Authors:  Weichang Yu; Jonathan C Lamb; Fangpu Han; James A Birchler
Journal:  Genetics       Date:  2006-10-22       Impact factor: 4.562

7.  Analysis of genes associated with retrotransposons in the rice genome.

Authors:  Nicholas Krom; Jill Recla; Wusirika Ramakrishna
Journal:  Genetica       Date:  2007-12-09       Impact factor: 1.082

8.  Replication of nonautonomous retroelements in soybean appears to be both recent and common.

Authors:  Adam Wawrzynski; Tom Ashfield; Nicolas W G Chen; Jafar Mammadov; Ashley Nguyen; Ram Podicheti; Steven B Cannon; Vincent Thareau; Carine Ameline-Torregrosa; Ethalinda Cannon; Ben Chacko; Arnaud Couloux; Anita Dalwani; Roxanne Denny; Shweta Deshpande; Ashley N Egan; Natasha Glover; Stacy Howell; Dan Ilut; Hongshing Lai; Sara Martin Del Campo; Michelle Metcalf; Majesta O'Bleness; Bernard E Pfeil; Milind B Ratnaparkhe; Sylvie Samain; Iryna Sanders; Béatrice Ségurens; Mireille Sévignac; Sue Sherman-Broyles; Dominic M Tucker; Jing Yi; Jeff J Doyle; Valérie Geffroy; Bruce A Roe; M A Saghai Maroof; Nevin D Young; Roger W Innes
Journal:  Plant Physiol       Date:  2008-10-24       Impact factor: 8.340

9.  Evolutionary origin of the segmental duplication encompassing the wheat GLU-B1 locus encoding the overexpressed Bx7 (Bx7OE) high molecular weight glutenin subunit.

Authors:  Raja Ragupathy; Hamid A Naeem; Elsa Reimer; Odean M Lukow; Harry D Sapirstein; Sylvie Cloutier
Journal:  Theor Appl Genet       Date:  2007-11-06       Impact factor: 5.699

10.  Genomic microstructure and differential expression of the genes encoding UDP-glucose:sinapate glucosyltransferase (UGT84A9) in oilseed rape (Brassica napus).

Authors:  Juliane Mittasch; Sabine Mikolajewski; Frank Breuer; Dieter Strack; Carsten Milkowski
Journal:  Theor Appl Genet       Date:  2010-01-20       Impact factor: 5.699

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