Literature DB >> 16217649

Protein self-association in the cell: a mechanism for fine tuning the level of macromolecular crowding?

Damien Hall1.   

Abstract

A new role for protein self-association in the cell is discussed. An argument is advanced that when cellular protein is in its associated state the excluded volume component of the solution is minimized. Conversely, when cellular protein is in its dissociated state the excluded volume component of the solution is maximized. For proteins that make up a substantial fraction of the intracellular protein concentration, control of the self-association event thus presents itself as a means of regulating cellular processes that are influenced by different levels of volume exclusion. In this communication we examine how the control of protein association/dissociation might influence one such important process, namely the folding of a protein to a compact state.

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Year:  2005        PMID: 16217649     DOI: 10.1007/s00249-005-0016-8

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  21 in total

1.  Effects of macromolecular crowding on protein folding and aggregation.

Authors:  B van den Berg; R J Ellis; C M Dobson
Journal:  EMBO J       Date:  1999-12-15       Impact factor: 11.598

2.  Effect of dextran on protein stability and conformation attributed to macromolecular crowding.

Authors:  Kenji Sasahara; Peter McPhie; Allen P Minton
Journal:  J Mol Biol       Date:  2003-02-28       Impact factor: 5.469

3.  Atomic-level observation of macromolecular crowding effects: escape of a protein from the GroEL cage.

Authors:  Adrian H Elcock
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-24       Impact factor: 11.205

4.  Duplex dissociation of telomere DNAs induced by molecular crowding.

Authors:  Daisuke Miyoshi; Shizuka Matsumura; Shu-Ichi Nakano; Naoki Sugimoto
Journal:  J Am Chem Soc       Date:  2004-01-14       Impact factor: 15.419

5.  Model for the role of macromolecular crowding in regulation of cellular volume.

Authors:  A P Minton; G C Colclasure; J C Parker
Journal:  Proc Natl Acad Sci U S A       Date:  1992-11-01       Impact factor: 11.205

6.  Models for excluded volume interaction between an unfolded protein and rigid macromolecular cosolutes: macromolecular crowding and protein stability revisited.

Authors:  Allen P Minton
Journal:  Biophys J       Date:  2004-12-13       Impact factor: 4.033

7.  Macromolecular crowding accelerates amyloid formation by human apolipoprotein C-II.

Authors:  Danny M Hatters; Allen P Minton; Geoffrey J Howlett
Journal:  J Biol Chem       Date:  2001-12-18       Impact factor: 5.157

8.  Mixed macromolecular crowding accelerates the oxidative refolding of reduced, denatured lysozyme: implications for protein folding in intracellular environments.

Authors:  Bing-Rui Zhou; Yi Liang; Fen Du; Zheng Zhou; Jie Chen
Journal:  J Biol Chem       Date:  2004-10-19       Impact factor: 5.157

9.  Protein folding by the effects of macromolecular crowding.

Authors:  Nobuhiko Tokuriki; Masataka Kinjo; Shigeru Negi; Masaru Hoshino; Yuji Goto; Itaru Urabe; Tetsuya Yomo
Journal:  Protein Sci       Date:  2004-01       Impact factor: 6.725

10.  Estimation of macromolecule concentrations and excluded volume effects for the cytoplasm of Escherichia coli.

Authors:  S B Zimmerman; S O Trach
Journal:  J Mol Biol       Date:  1991-12-05       Impact factor: 5.469

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  8 in total

1.  Coarse-grained molecular simulation of diffusion and reaction kinetics in a crowded virtual cytoplasm.

Authors:  Douglas Ridgway; Gordon Broderick; Ana Lopez-Campistrous; Melania Ru'aini; Philip Winter; Matthew Hamilton; Pierre Boulanger; Andriy Kovalenko; Michael J Ellison
Journal:  Biophys J       Date:  2008-01-30       Impact factor: 4.033

Review 2.  Macromolecular crowding and confinement: biochemical, biophysical, and potential physiological consequences.

Authors:  Huan-Xiang Zhou; Germán Rivas; Allen P Minton
Journal:  Annu Rev Biophys       Date:  2008       Impact factor: 12.981

3.  The functional roles of the unstructured N- and C-terminal regions in αB-crystallin and other mammalian small heat-shock proteins.

Authors:  John A Carver; Aidan B Grosas; Heath Ecroyd; Roy A Quinlan
Journal:  Cell Stress Chaperones       Date:  2017-04-08       Impact factor: 3.667

Review 4.  Toward an understanding of biochemical equilibria within living cells.

Authors:  Germán Rivas; Allen P Minton
Journal:  Biophys Rev       Date:  2017-12-12

5.  Mimicking the plant cell interior under water stress by macromolecular crowding: disordered dehydrin proteins are highly resistant to structural collapse.

Authors:  Jean-Marie Mouillon; Sylvia K Eriksson; Pia Harryson
Journal:  Plant Physiol       Date:  2008-10-10       Impact factor: 8.340

6.  On the nature of the optimal form of the holdase-type chaperone stress response.

Authors:  Damien Hall
Journal:  FEBS Lett       Date:  2019-09-21       Impact factor: 3.864

Review 7.  Measurement of amyloid formation by turbidity assay-seeing through the cloud.

Authors:  Ran Zhao; Masatomo So; Hendrik Maat; Nicholas J Ray; Fumio Arisaka; Yuji Goto; John A Carver; Damien Hall
Journal:  Biophys Rev       Date:  2016-11-23

8.  Chaperone-Like Activity of HSPB5: The Effects of Quaternary Structure Dynamics and Crowding.

Authors:  Natalia A Chebotareva; Svetlana G Roman; Vera A Borzova; Tatiana B Eronina; Valeriya V Mikhaylova; Boris I Kurganov
Journal:  Int J Mol Sci       Date:  2020-07-13       Impact factor: 5.923

  8 in total

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