Literature DB >> 16217012

Interface connections of a transmembrane voltage sensor.

J Alfredo Freites1, Douglas J Tobias, Gunnar von Heijne, Stephen H White.   

Abstract

Voltage-sensitive ion channels open and close in response to changes in transmembrane (TM) potential caused by the motion of the S4 voltage sensors. These sensors are alpha-helices that include four or more positively charged amino acids, most commonly arginine. The so-called paddle model, based on the high-resolution structure of the KvAP K+ channel [Jiang, et al. (2003) Nature 423, 33-41], posits that the S4 sensors move within the membrane bilayer in response to TM voltage changes. Direct exposure of S4 sensors to lipid is contrary to the classical expectation that the dielectric contrast between the membrane hydrocarbon core and water presents an insurmountable energetic penalty to burial of electric charges. Nevertheless, recent experiments have shown that a helix with the sequence of KvAP S4 can be inserted across the endoplasmic reticulum membrane. To reconcile this result with the classical energetics argument, we have carried out a molecular dynamics simulation of an isolated TM S4 helix in a lipid bilayer. The simulation reveals a stabilizing hydrogen-bonded network of water and lipid phosphates around the arginines that reduces the effective thickness of the bilayer hydrocarbon core to approximately 10 A in the vicinity of the helix. It suggests that bilayer phospholipids can adapt locally to strongly perturbing protein elements, causing the phospholipids to become a structural extension of the protein.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16217012      PMCID: PMC1250233          DOI: 10.1073/pnas.0507618102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  27 in total

Review 1.  Electrostatics calculations: recent methodological advances and applications to membranes.

Authors:  D J Tobias
Journal:  Curr Opin Struct Biol       Date:  2001-04       Impact factor: 6.809

2.  Neuroscience. The puzzling portrait of a pore.

Authors:  Greg Miller
Journal:  Science       Date:  2003-06-27       Impact factor: 47.728

Review 3.  Answers and questions from the KvAP structures.

Authors:  Bruce E Cohen; Michael Grabe; Lily Yeh Jan
Journal:  Neuron       Date:  2003-07-31       Impact factor: 17.173

Review 4.  Stirring up controversy with a voltage sensor paddle.

Authors:  Christopher A Ahern; Richard Horn
Journal:  Trends Neurosci       Date:  2004-06       Impact factor: 13.837

5.  Voltage sensor of Kv1.2: structural basis of electromechanical coupling.

Authors:  Stephen B Long; Ernest B Campbell; Roderick Mackinnon
Journal:  Science       Date:  2005-07-07       Impact factor: 47.728

6.  Intrinsic helical propensities and stable secondary structure in a membrane-bound fragment (S4) of the shaker potassium channel.

Authors:  A Halsall; C E Dempsey
Journal:  J Mol Biol       Date:  1999-11-05       Impact factor: 5.469

7.  A possible role for phosphate in complexing the arginines of S4 in voltage gated channels.

Authors:  Michael E Green
Journal:  J Theor Biol       Date:  2004-11-30       Impact factor: 2.691

Review 8.  A structural vignette common to voltage sensors and conduction pores: canaliculi.

Authors:  S A Goldstein
Journal:  Neuron       Date:  1996-04       Impact factor: 17.173

9.  Circulation of H+ and K+ across the plasma membrane is not obligatory for bacterial growth.

Authors:  F M Harold; J Van Brunt
Journal:  Science       Date:  1977-07-22       Impact factor: 47.728

10.  High apparent dielectric constants in the interior of a protein reflect water penetration.

Authors:  J J Dwyer; A G Gittis; D A Karp; E E Lattman; D S Spencer; W E Stites; B García-Moreno E
Journal:  Biophys J       Date:  2000-09       Impact factor: 4.033

View more
  108 in total

1.  Flow-induced beta-hairpin folding of the glycoprotein Ibalpha beta-switch.

Authors:  Xueqing Zou; Yanxin Liu; Zhongzhou Chen; Gloria Ines Cárdenas-Jirón; Klaus Schulten
Journal:  Biophys J       Date:  2010-08-09       Impact factor: 4.033

2.  Coupling of retinal, protein, and water dynamics in squid rhodopsin.

Authors:  Eduardo Jardón-Valadez; Ana-Nicoleta Bondar; Douglas J Tobias
Journal:  Biophys J       Date:  2010-10-06       Impact factor: 4.033

3.  Profile structures of the voltage-sensor domain and the voltage-gated K(+)-channel vectorially oriented in a single phospholipid bilayer membrane at the solid-vapor and solid-liquid interfaces determined by x-ray interferometry.

Authors:  S Gupta; J Liu; J Strzalka; J K Blasie
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2011-09-12

4.  Amino-acid solvation structure in transmembrane helices from molecular dynamics simulations.

Authors:  Anna C V Johansson; Erik Lindahl
Journal:  Biophys J       Date:  2006-09-29       Impact factor: 4.033

5.  Bilayer deformation by the Kv channel voltage sensor domain revealed by self-assembly simulations.

Authors:  Peter J Bond; Mark S P Sansom
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-14       Impact factor: 11.205

6.  Molecular dynamics simulations suggest a mechanism for translocation of the HIV-1 TAT peptide across lipid membranes.

Authors:  Henry D Herce; Angel E Garcia
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-18       Impact factor: 11.205

7.  Environment of the gating charges in the Kv1.2 Shaker potassium channel.

Authors:  Werner Treptow; Mounir Tarek
Journal:  Biophys J       Date:  2006-03-13       Impact factor: 4.033

8.  Implicit membrane treatment of buried charged groups: application to peptide translocation across lipid bilayers.

Authors:  Themis Lazaridis; John M Leveritt; Leo PeBenito
Journal:  Biochim Biophys Acta       Date:  2014-02-10

9.  Self-induced docking site of a deeply embedded peripheral membrane protein.

Authors:  Simon Jaud; Douglas J Tobias; Joseph J Falke; Stephen H White
Journal:  Biophys J       Date:  2006-10-27       Impact factor: 4.033

10.  Dynamic Heterogeneous Dielectric Generalized Born (DHDGB): An implicit membrane model with a dynamically varying bilayer thickness.

Authors:  Afra Panahi; Michael Feig
Journal:  J Chem Theory Comput       Date:  2013-03-12       Impact factor: 6.006

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.