Literature DB >> 16207996

Use of the Diversi Lab System for species and strain differentiation of Fusarium species isolates.

M Healy1, K Reece, D Walton, J Huong, S Frye, I I Raad, D P Kontoyiannis.   

Abstract

Advances in molecular typing of fusariosis would facilitate the study of its epidemiology. We tested 26 such isolates by the commercially available Diversi Lab System. The system utilizes automated repetitive sequence-based PCR (rep-PCR) and web-based data analyses. rep-PCR dendrogram cluster analysis showed agreement with species sequence identification (elongation factor 1 alpha gene). Additionally, subtype differences within the same species were noted.

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Year:  2005        PMID： 16207996      PMCID： PMC1248465          DOI： 10.1128/JCM.43.10.5278-5280.2005

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  15 in total

1.  Fusarium verticillioides abscess of the nasal septum in an immunosuppressed child: case report and identification of the morphologically atypical fungal strain.

Authors:  Hans Jürgen Dornbusch; Walter Buzina; Richard C Summerbell; Cornelia Lass-Flörl; Herwig Lackner; Wolfgang Schwinger; Petra Sovinz; Christian Urban
Journal:  J Clin Microbiol       Date:  2005-04       Impact factor: 5.948

2.  Evolutionary history of the impala transposon in Fusarium oxysporum.

Authors:  A Hua-Van; T Langin; M J Daboussi
Journal:  Mol Biol Evol       Date:  2001-10       Impact factor: 16.240

3.  Zygomycosis in a tertiary-care cancer center in the era of Aspergillus-active antifungal therapy: a case-control observational study of 27 recent cases.

Authors:  Dimitrios P Kontoyiannis; Michail S Lionakis; Russell E Lewis; Georgios Chamilos; Mimi Healy; Cheryl Perego; Amar Safdar; Hagop Kantarjian; Richard Champlin; Thomas J Walsh; Issam I Raad
Journal:  J Infect Dis       Date:  2005-03-16       Impact factor: 5.226

4.  DNA fingerprinting of Candida rugosa via repetitive sequence-based PCR.

Authors:  R J Redkar; M P Dubé; F K McCleskey; M G Rinaldi; V G Del Vecchio
Journal:  J Clin Microbiol       Date:  1996-07       Impact factor: 5.948

5.  Identification of Fusarium species involved in human infections by 28S rRNA gene sequencing.

Authors:  C Hennequin; E Abachin; F Symoens; V Lavarde; G Reboux; N Nolard; P Berche
Journal:  J Clin Microbiol       Date:  1999-11       Impact factor: 5.948

Review 6.  Fusarium, a significant emerging pathogen in patients with hematologic malignancy: ten years' experience at a cancer center and implications for management.

Authors:  E I Boutati; E J Anaissie
Journal:  Blood       Date:  1997-08-01       Impact factor: 22.113

7.  Genetic diversity of human pathogenic members of the Fusarium oxysporum complex inferred from multilocus DNA sequence data and amplified fragment length polymorphism analyses: evidence for the recent dispersion of a geographically widespread clonal lineage and nosocomial origin.

Authors:  Kerry O'Donnell; Deanna A Sutton; Michael G Rinaldi; Karen C Magnon; Patricia A Cox; Sanjay G Revankar; Stephen Sanche; David M Geiser; Jean H Juba; Jo-Anne H van Burik; Arvind Padhye; Elias J Anaissie; Andrea Francesconi; Thomas J Walsh; Jody S Robinson
Journal:  J Clin Microbiol       Date:  2004-11       Impact factor: 5.948

8.  Analysis of phylogenetic relationship of Cylindrocarpon lichenicola and Acremonium falciforme to the Fusarium solani species complex and a review of similarities in the spectrum of opportunistic infections caused by these fungi.

Authors:  R C Summerbell; H-J Schroers
Journal:  J Clin Microbiol       Date:  2002-08       Impact factor: 5.948

9.  Epidemiology, molecular mycology, and environmental sources of Fusarium infection in patients with cancer.

Authors:  Issam Raad; Jeffrey Tarrand; Hend Hanna; Maher Albitar; Erle Janssen; Maha Boktour; Gerald Bodey; Masoud Mardani; Ray Hachem; Dimitrios Kontoyiannis; Estella Whimbey; Kenneth Rolston
Journal:  Infect Control Hosp Epidemiol       Date:  2002-09       Impact factor: 3.254

10.  Gene Genealogies and AFLP Analyses in the Fusarium oxysporum Complex Identify Monophyletic and Nonmonophyletic Formae Speciales Causing Wilt and Rot Disease.

Authors:  R P Baayen; K O'Donnell; P J Bonants; E Cigelnik; L P Kroon; E J Roebroeck; C Waalwijk
Journal:  Phytopathology       Date:  2000-08       Impact factor: 4.025
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  21 in total

1.  Comparison of typing results obtained for methicillin-resistant Staphylococcus aureus isolates with the DiversiLab system and pulsed-field gel electrophoresis.

Authors:  Fred C Tenover; Emily A Gay; Stacie Frye; Samantha J Eells; Mimi Healy; John E McGowan
Journal:  J Clin Microbiol       Date:  2009-06-24       Impact factor: 5.948

2.  Repetitive-sequence-based PCR using the DiversiLab system for identification of Aspergillus species.

Authors:  Dewey Hansen; Mimi Healy; Kristy Reece; Cheryl Smith; Gail L Woods
Journal:  J Clin Microbiol       Date:  2008-03-26       Impact factor: 5.948

3.  Conventional Morphology Versus PCR Sequencing, rep-PCR, and MALDI-TOF-MS for Identification of Clinical Aspergillus Isolates Collected Over a 2-Year Period in a University Hospital at Kayseri, Turkey.

Authors:  Altay Atalay; Ayse Nedret Koc; Ahmet Suel; Hafize Sav; Gonca Demir; Ferhan Elmali; Nuri Cakir; Seyedmojtaba Seyedmousavi
Journal:  J Clin Lab Anal       Date:  2016-03-01       Impact factor: 2.352

4.  Identification of Histoplasma capsulatum, Blastomyces dermatitidis, and Coccidioides species by repetitive-sequence-based PCR.

Authors:  June I Pounder; Dewey Hansen; Gail L Woods
Journal:  J Clin Microbiol       Date:  2006-08       Impact factor: 5.948

Review 5.  Fusarium infection in lung transplant patients: report of 6 cases and review of the literature.

Authors:  Herman A Carneiro; Jeffrey J Coleman; Alejandro Restrepo; Eleftherios Mylonakis
Journal:  Medicine (Baltimore)       Date:  2011-01       Impact factor: 1.889

6.  Genotypic analysis of invasive Streptococcus pneumoniae from Mali, Africa, by semiautomated repetitive-element PCR and pulsed-field gel electrophoresis.

Authors:  S M Harrington; F Stock; A L Kominski; J D Campbell; J C Hormazabal; S Livio; L Rao; K L Kotloff; S O Sow; P R Murray
Journal:  J Clin Microbiol       Date:  2006-12-27       Impact factor: 5.948

7.  Emerging Trichosporon asahii in elderly patients: epidemiological and molecular analysis by the DiversiLab system.

Authors:  M Treviño; C García-Riestra; P Areses; X García; D Navarro; F J Suárez; I A López-Dequidt; O Zaragoza; M Cuenca-Estrella
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2014-04-10       Impact factor: 3.267

8.  Rapid molecular genotyping and clonal complex assignment of Staphylococcus aureus isolates by PCR coupled to electrospray ionization-mass spectrometry.

Authors:  Thomas A Hall; Rangarajan Sampath; Lawrence B Blyn; Raymond Ranken; Cristina Ivy; Rachael Melton; Heather Matthews; Neill White; Feng Li; Vanessa Harpin; David J Ecker; Linda K McDougal; Brandi Limbago; Tracy Ross; Donna M Wolk; Vicki Wysocki; Karen C Carroll
Journal:  J Clin Microbiol       Date:  2009-03-18       Impact factor: 5.948

9.  Adhesin genes and serum resistance in Haemophilus influenzae type f isolates.

Authors:  Michael E Watson; Kevin L Nelson; Victoria Nguyen; Carey-Ann D Burnham; Jill E Clarridge; Xuan Qin; Arnold L Smith
Journal:  J Med Microbiol       Date:  2012-12-14       Impact factor: 2.472

10.  Species distribution and in vitro antifungal susceptibility patterns of 75 clinical isolates of Fusarium spp. from northern Italy.

Authors:  Anna Maria Tortorano; Anna Prigitano; Giovanna Dho; Maria Carmela Esposto; Claudia Gianni; Anna Grancini; Cristina Ossi; Maria Anna Viviani
Journal:  Antimicrob Agents Chemother       Date:  2008-04-28       Impact factor: 5.191
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