Literature DB >> 16204813

Physical schemata underlying biological pattern formation-examples, issues and strategies.

Herbert Levine1, Eshel Ben-Jacob.   

Abstract

Biological systems excel at building spatial structures on scales ranging from nanometers to kilometers and exhibit temporal patterning from milliseconds to years. One approach that nature has taken to accomplish this relies on the harnessing of pattern-forming processes of non-equilibrium physics and chemistry. For these systems, the study of biological pattern formation starts with placing a biological phenomenon of interest within the context of the proper pattern-formation schema and then focusing on the ways in which control is exerted to adapt the pattern to the needs of the organism. This approach is illustrated by several examples, notably bacterial colonies (diffusive-growth schema) and intracellular calcium waves (excitable-media schema).

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Year:  2004        PMID: 16204813     DOI: 10.1088/1478-3967/1/2/P01

Source DB:  PubMed          Journal:  Phys Biol        ISSN: 1478-3967            Impact factor:   2.583


  14 in total

1.  Functional holography of recorded neuronal networks activity.

Authors:  Itay Baruchi; Eshel Ben-Jacob
Journal:  Neuroinformatics       Date:  2004

2.  Self-engineering capabilities of bacteria.

Authors:  Eshel Ben-Jacob; Herbert Levine
Journal:  J R Soc Interface       Date:  2006-02-22       Impact factor: 4.118

Review 3.  Perspective: network-guided pattern formation of neural dynamics.

Authors:  Marc-Thorsten Hütt; Marcus Kaiser; Claus C Hilgetag
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-10-05       Impact factor: 6.237

4.  Limb, tooth, beak: three modes of development and evolutionary innovation of form.

Authors:  Marta Linde-Medina; Stuart A Newman
Journal:  J Biosci       Date:  2014-04       Impact factor: 1.826

Review 5.  'Biogeneric' developmental processes: drivers of major transitions in animal evolution.

Authors:  Stuart A Newman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-08-19       Impact factor: 6.237

6.  Self-organization of bacterial biofilms is facilitated by extracellular DNA.

Authors:  Erin S Gloag; Lynne Turnbull; Alan Huang; Pascal Vallotton; Huabin Wang; Laura M Nolan; Lisa Mililli; Cameron Hunt; Jing Lu; Sarah R Osvath; Leigh G Monahan; Rosalia Cavaliere; Ian G Charles; Matt P Wand; Michelle L Gee; Ranganathan Prabhakar; Cynthia B Whitchurch
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-24       Impact factor: 11.205

7.  Patterning of mutually interacting bacterial bodies: close contacts and airborne signals.

Authors:  Jaroslav J Cepl; Irena Pátková; Anna Blahůsková; Fatima Cvrcková; Anton Markos
Journal:  BMC Microbiol       Date:  2010-05-12       Impact factor: 3.605

8.  Ernest Everett Just: Egg and embryo as excitable systems.

Authors:  W Malcolm Byrnes; Stuart A Newman
Journal:  J Exp Zool B Mol Dev Evol       Date:  2014-03-24       Impact factor: 2.656

9.  Strong inter-population cooperation leads to partner intermixing in microbial communities.

Authors:  Babak Momeni; Kristen A Brileya; Matthew W Fields; Wenying Shou
Journal:  Elife       Date:  2013-01-22       Impact factor: 8.140

10.  Swarming and complex pattern formation in Paenibacillus vortex studied by imaging and tracking cells.

Authors:  Colin J Ingham; Eshel Ben Jacob
Journal:  BMC Microbiol       Date:  2008-02-25       Impact factor: 3.605

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