Literature DB >> 16204215

The RSC chromatin remodeling complex bears an essential fungal-specific protein module with broad functional roles.

Boris Wilson1, Hediye Erdjument-Bromage, Paul Tempst, Bradley R Cairns.   

Abstract

RSC is an essential and abundant ATP-dependent chromatin remodeling complex from Saccharomyces cerevisiae. Here we show that the RSC components Rsc7/Npl6 and Rsc14/Ldb7 interact physically and/or functionally with Rsc3, Rsc30, and Htl1 to form a module important for a broad range of RSC functions. A strain lacking Rsc7 fails to properly assemble RSC, which confers sensitivity to temperature and to agents that cause DNA damage, microtubule depolymerization, or cell wall stress (likely via transcriptional misregulation). Cells lacking Rsc14 display sensitivity to cell wall stress and are deficient in the assembly of Rsc3 and Rsc30. Interestingly, certain rsc7delta and rsc14delta phenotypes are suppressed by an increased dosage of Rsc3, an essential RSC member with roles in cell wall integrity and spindle checkpoint pathways. Thus, Rsc7 and Rsc14 have different roles in the module as well as sharing physical and functional connections to Rsc3. Using a genetic array of nonessential null mutations (SGA) we identified mutations that are sick/lethal in combination with the rsc7delta mutation, which revealed connections to a surprisingly large number of chromatin remodeling complexes and cellular processes. Taken together, we define a protein module on the RSC complex with links to a broad spectrum of cellular functions.

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Year:  2005        PMID: 16204215      PMCID: PMC1456245          DOI: 10.1534/genetics.105.047589

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  56 in total

Review 1.  ATP-dependent chromatin-remodeling complexes.

Authors:  M Vignali; A H Hassan; K E Neely; J L Workman
Journal:  Mol Cell Biol       Date:  2000-03       Impact factor: 4.272

2.  Two functionally distinct forms of the RSC nucleosome-remodeling complex, containing essential AT hook, BAH, and bromodomains.

Authors:  B R Cairns; A Schlichter; H Erdjument-Bromage; P Tempst; R D Kornberg; F Winston
Journal:  Mol Cell       Date:  1999-11       Impact factor: 17.970

Review 3.  Cooperation between complexes that regulate chromatin structure and transcription.

Authors:  Geeta J Narlikar; Hua-Ying Fan; Robert E Kingston
Journal:  Cell       Date:  2002-02-22       Impact factor: 41.582

4.  The HTL1 gene (YCR020W-b) of Saccharomyces cerevisiae is necessary for growth at 37 degrees C, and for the conservation of chromosome stability and fertility.

Authors:  C Lanzuolo; S Ederle; A Pollice; F Russo; A Storlazzi; J F Pulitzer
Journal:  Yeast       Date:  2001-10       Impact factor: 3.239

Review 5.  Translating the histone code.

Authors:  T Jenuwein; C D Allis
Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

6.  Functional organization of the yeast proteome by systematic analysis of protein complexes.

Authors:  Anne-Claude Gavin; Markus Bösche; Roland Krause; Paola Grandi; Martina Marzioch; Andreas Bauer; Jörg Schultz; Jens M Rick; Anne-Marie Michon; Cristina-Maria Cruciat; Marita Remor; Christian Höfert; Malgorzata Schelder; Miro Brajenovic; Heinz Ruffner; Alejandro Merino; Karin Klein; Manuela Hudak; David Dickson; Tatjana Rudi; Volker Gnau; Angela Bauch; Sonja Bastuck; Bettina Huhse; Christina Leutwein; Marie-Anne Heurtier; Richard R Copley; Angela Edelmann; Erich Querfurth; Vladimir Rybin; Gerard Drewes; Manfred Raida; Tewis Bouwmeester; Peer Bork; Bertrand Seraphin; Bernhard Kuster; Gitte Neubauer; Giulio Superti-Furga
Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

7.  PKC1, a protein kinase C homologue of Saccharomyces cerevisiae, participates in microtubule function through the yeast EB1 homologue, BIM1.

Authors:  T Hosotani; H Koyama; M Uchino; T Miyakawa; E Tsuchiya
Journal:  Genes Cells       Date:  2001-09       Impact factor: 1.891

8.  Systematic genetic analysis with ordered arrays of yeast deletion mutants.

Authors:  A H Tong; M Evangelista; A B Parsons; H Xu; G D Bader; N Pagé; M Robinson; S Raghibizadeh; C W Hogue; H Bussey; B Andrews; M Tyers; C Boone
Journal:  Science       Date:  2001-12-14       Impact factor: 47.728

9.  A Rsc3/Rsc30 zinc cluster dimer reveals novel roles for the chromatin remodeler RSC in gene expression and cell cycle control.

Authors:  M L Angus-Hill; A Schlichter; D Roberts; H Erdjument-Bromage; P Tempst; B R Cairns
Journal:  Mol Cell       Date:  2001-04       Impact factor: 17.970

10.  Tandem bromodomains in the chromatin remodeler RSC recognize acetylated histone H3 Lys14.

Authors:  Margaret Kasten; Heather Szerlong; Hediye Erdjument-Bromage; Paul Tempst; Michel Werner; Bradley R Cairns
Journal:  EMBO J       Date:  2004-03-04       Impact factor: 11.598

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  37 in total

1.  RSC mobilizes nucleosomes to improve accessibility of repair machinery to the damaged chromatin.

Authors:  Eun Yong Shim; Soo Jin Hong; Ji-Hyun Oum; Yvonne Yanez; Yu Zhang; Sang Eun Lee
Journal:  Mol Cell Biol       Date:  2006-12-18       Impact factor: 4.272

2.  High-resolution DNA-binding specificity analysis of yeast transcription factors.

Authors:  Cong Zhu; Kelsey J R P Byers; Rachel Patton McCord; Zhenwei Shi; Michael F Berger; Daniel E Newburger; Katrina Saulrieta; Zachary Smith; Mita V Shah; Mathangi Radhakrishnan; Anthony A Philippakis; Yanhui Hu; Federico De Masi; Marcin Pacek; Andreas Rolfs; Tal Murthy; Joshua Labaer; Martha L Bulyk
Journal:  Genome Res       Date:  2009-01-21       Impact factor: 9.043

3.  RSC facilitates Rad59-dependent homologous recombination between sister chromatids by promoting cohesin loading at DNA double-strand breaks.

Authors:  Ji-Hyun Oum; Changhyun Seong; Youngho Kwon; Jae-Hoon Ji; Amy Sid; Sreejith Ramakrishnan; Grzegorz Ira; Anna Malkova; Patrick Sung; Sang Eun Lee; Eun Yong Shim
Journal:  Mol Cell Biol       Date:  2011-08-01       Impact factor: 4.272

4.  A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding.

Authors:  Monique Floer; Xin Wang; Vidya Prabhu; Georgina Berrozpe; Santosh Narayan; Dan Spagna; David Alvarez; Jude Kendall; Alexander Krasnitz; Asya Stepansky; James Hicks; Gene O Bryant; Mark Ptashne
Journal:  Cell       Date:  2010-04-30       Impact factor: 41.582

5.  The conserved PBAF nucleosome-remodeling complex mediates the response to stress in Caenorhabditis elegans.

Authors:  Aleksandra Kuzmanov; Evguenia I Karina; Natalia V Kirienko; David S Fay
Journal:  Mol Cell Biol       Date:  2014-01-13       Impact factor: 4.272

6.  Comparative Genomics and Transcriptomics To Analyze Fruiting Body Development in Filamentous Ascomycetes.

Authors:  Ramona Lütkenhaus; Stefanie Traeger; Jan Breuer; Laia Carreté; Alan Kuo; Anna Lipzen; Jasmyn Pangilinan; David Dilworth; Laura Sandor; Stefanie Pöggeler; Toni Gabaldón; Kerrie Barry; Igor V Grigoriev; Minou Nowrousian
Journal:  Genetics       Date:  2019-10-11       Impact factor: 4.562

7.  Loss of Snf5 Induces Formation of an Aberrant SWI/SNF Complex.

Authors:  Payel Sen; Jie Luo; Arjan Hada; Solomon G Hailu; Mekonnen Lemma Dechassa; Jim Persinger; Sandipan Brahma; Somnath Paul; Jeff Ranish; Blaine Bartholomew
Journal:  Cell Rep       Date:  2017-02-28       Impact factor: 9.423

8.  Hsp90 and p23 Molecular Chaperones Control Chromatin Architecture by Maintaining the Functional Pool of the RSC Chromatin Remodeler.

Authors:  Frank J Echtenkamp; Zlata Gvozdenov; Nicholas L Adkins; Yang Zhang; Melinda Lynch-Day; Shinya Watanabe; Craig L Peterson; Brian C Freeman
Journal:  Mol Cell       Date:  2016-11-03       Impact factor: 17.970

9.  Members of the RSC chromatin-remodeling complex are required for maintaining proper nuclear envelope structure and pore complex localization.

Authors:  Laura C Titus; T Renee Dawson; Deborah J Rexer; Kathryn J Ryan; Susan R Wente
Journal:  Mol Biol Cell       Date:  2010-01-28       Impact factor: 4.138

10.  Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment.

Authors:  Anna Shevchenko; Assen Roguev; Daniel Schaft; Luke Buchanan; Bianca Habermann; Cagri Sakalar; Henrik Thomas; Nevan J Krogan; Andrej Shevchenko; A Francis Stewart
Journal:  Genome Biol       Date:  2008-11-28       Impact factor: 13.583

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