Literature DB >> 16199659

Thermodynamic analysis of the aggregation propensity of oxidized Alzheimer's beta-amyloid variants.

Peter Hortschansky1, Tony Christopeit, Volker Schroeckh, Marcus Fändrich.   

Abstract

We have determined the critical concentrations of a set of 18 variants of Alzheimer's Abeta(1-40) peptide, each carrying a different residue at position 18. We find that the critical concentrations depend on the hydrophobicity and beta-sheet propensity of residue 18, and therefore on properties that we identified previously to affect also the kinetics by which these peptides aggregate. Since the critical concentrations can be related to the Gibbs free energy of aggregation (DeltaG), these data imply a link between the thermodynamics and the kinetics of aggregation in that sequences that form very stable aggregates are also those that form such aggregates very rapidly.

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Year:  2005        PMID: 16199659      PMCID: PMC2253225          DOI: 10.1110/ps.051585905

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  15 in total

1.  Intrinsic beta-sheet propensities result from van der Waals interactions between side chains and the local backbone.

Authors:  A G Street; S L Mayo
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

2.  Mapping abeta amyloid fibril secondary structure using scanning proline mutagenesis.

Authors:  Angela D Williams; Erik Portelius; Indu Kheterpal; Jun-tao Guo; Kelsey D Cook; Ying Xu; Ronald Wetzel
Journal:  J Mol Biol       Date:  2004-01-16       Impact factor: 5.469

3.  The role of aromaticity, exposed surface, and dipole moment in determining protein aggregation rates.

Authors:  Gian Gaetano Tartaglia; Andrea Cavalli; Riccardo Pellarin; Amedeo Caflisch
Journal:  Protein Sci       Date:  2004-05-28       Impact factor: 6.725

4.  Analysis of the secondary structure of beta-amyloid (Abeta42) fibrils by systematic proline replacement.

Authors:  Akira Morimoto; Kazuhiro Irie; Kazuma Murakami; Yuichi Masuda; Hajime Ohigashi; Masaya Nagao; Hiroyuki Fukuda; Takahiko Shimizu; Takuji Shirasawa
Journal:  J Biol Chem       Date:  2004-09-30       Impact factor: 5.157

5.  FTIR reveals structural differences between native beta-sheet proteins and amyloid fibrils.

Authors:  Giorgia Zandomeneghi; Mark R H Krebs; Margaret G McCammon; Marcus Fändrich
Journal:  Protein Sci       Date:  2004-11-10       Impact factor: 6.725

6.  The aggregation kinetics of Alzheimer's beta-amyloid peptide is controlled by stochastic nucleation.

Authors:  Peter Hortschansky; Volker Schroeckh; Tony Christopeit; Giorgia Zandomeneghi; Marcus Fändrich
Journal:  Protein Sci       Date:  2005-06-03       Impact factor: 6.725

7.  Solution structure of methionine-oxidized amyloid beta-peptide (1-40). Does oxidation affect conformational switching?

Authors:  A A Watson; D P Fairlie; D J Craik
Journal:  Biochemistry       Date:  1998-09-15       Impact factor: 3.162

Review 8.  Models of amyloid seeding in Alzheimer's disease and scrapie: mechanistic truths and physiological consequences of the time-dependent solubility of amyloid proteins.

Authors:  J D Harper; P T Lansbury
Journal:  Annu Rev Biochem       Date:  1997       Impact factor: 23.643

9.  Raft lipids as common components of human extracellular amyloid fibrils.

Authors:  Gerald P Gellermann; Thomas R Appel; Astrid Tannert; Anja Radestock; Peter Hortschansky; Volker Schroeckh; Christian Leisner; Tim Lütkepohl; Shmuel Shtrasburg; Christoph Röcken; Mordechai Pras; Reinhold P Linke; Stephan Diekmann; Marcus Fändrich
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-25       Impact factor: 11.205

10.  Effects of sequential proline substitutions on amyloid formation by human amylin20-29.

Authors:  D F Moriarty; D P Raleigh
Journal:  Biochemistry       Date:  1999-02-09       Impact factor: 3.162

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  9 in total

1.  Mutagenic exploration of the cross-seeding and fibrillation propensity of Alzheimer's beta-amyloid peptide variants.

Authors:  Alexander Peim; Peter Hortschansky; Tony Christopeit; Volker Schroeckh; Walter Richter; Marcus Fändrich
Journal:  Protein Sci       Date:  2006-06-02       Impact factor: 6.725

2.  Similarities in the thermodynamics and kinetics of aggregation of disease-related Abeta(1-40) peptides.

Authors:  Jessica Meinhardt; Gian Gaetano Tartaglia; Amol Pawar; Tony Christopeit; Peter Hortschansky; Volker Schroeckh; Christopher M Dobson; Michele Vendruscolo; Marcus Fändrich
Journal:  Protein Sci       Date:  2007-06       Impact factor: 6.725

3.  Site-specific modification of Alzheimer's peptides by cholesterol oxidation products enhances aggregation energetics and neurotoxicity.

Authors:  Kenji Usui; John D Hulleman; Johan F Paulsson; Sarah J Siegel; Evan T Powers; Jeffery W Kelly
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-19       Impact factor: 11.205

4.  The Alzheimer disease protective mutation A2T modulates kinetic and thermodynamic properties of amyloid-β (Aβ) aggregation.

Authors:  Iryna Benilova; Rodrigo Gallardo; Andreea-Alexandra Ungureanu; Virginia Castillo Cano; An Snellinx; Meine Ramakers; Carmen Bartic; Frederic Rousseau; Joost Schymkowitz; Bart De Strooper
Journal:  J Biol Chem       Date:  2014-09-24       Impact factor: 5.157

5.  Mechanisms of aggregation and fibril formation of the amyloidogenic N-terminal fragment of apolipoprotein A-I.

Authors:  Chiharu Mizuguchi; Miho Nakagawa; Norihiro Namba; Misae Sakai; Naoko Kurimitsu; Ayane Suzuki; Kaho Fujita; Sayaka Horiuchi; Teruhiko Baba; Takashi Ohgita; Kazuchika Nishitsuji; Hiroyuki Saito
Journal:  J Biol Chem       Date:  2019-07-24       Impact factor: 5.157

6.  Protein aggregate formation permits millennium-old brain preservation.

Authors:  Axel Petzold; Ching-Hua Lu; Mike Groves; Johan Gobom; Henrik Zetterberg; Gerry Shaw; Sonia O'Connor
Journal:  J R Soc Interface       Date:  2020-01-08       Impact factor: 4.118

7.  Mechanism of amyloid plaque formation suggests an intracellular basis of Abeta pathogenicity.

Authors:  Ralf P Friedrich; Katharina Tepper; Raik Rönicke; Malle Soom; Martin Westermann; Klaus Reymann; Christoph Kaether; Marcus Fändrich
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-19       Impact factor: 11.205

8.  Homotypic fibrillization of TMEM106B across diverse neurodegenerative diseases.

Authors:  Andrew Chang; Xinyu Xiang; Jing Wang; Carolyn Lee; Tamta Arakhamia; Marija Simjanoska; Chi Wang; Yari Carlomagno; Guoan Zhang; Shikhar Dhingra; Manon Thierry; Jolien Perneel; Bavo Heeman; Lauren M Forgrave; Michael DeTure; Mari L DeMarco; Casey N Cook; Rosa Rademakers; Dennis W Dickson; Leonard Petrucelli; Michael H B Stowell; Ian R A Mackenzie; Anthony W P Fitzpatrick
Journal:  Cell       Date:  2022-03-04       Impact factor: 66.850

9.  Existence of different structural intermediates on the fibrillation pathway of human serum albumin.

Authors:  Josué Juárez; Pablo Taboada; Víctor Mosquera
Journal:  Biophys J       Date:  2009-03-18       Impact factor: 4.033

  9 in total

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