Literature DB >> 16196059

Moment analysis for kinetics of gene silencing by RNA interference.

Yuki Takahashi1, Kiyoshi Yamaoka, Makiya Nishikawa, Yoshinobu Takakura.   

Abstract

RNA interference (RNAi) was quantitatively evaluated from a kinetic viewpoint. A simple kinetic evaluation based on moment analysis was proposed, assuming suppression and recovery phases of gene expression. We defined the area under the curve of the inhibitory effect (AUC(IE)) as an index of the total intensity of RNAi and the mean response time of the inhibitory effect (MRT(IE)) as an index of its duration. The proposed kinetic analysis helps to understand the RNAi effect in a quantitative and time-dependent manner, which will be beneficial for designing RNAi-based gene silencing for both experimental and therapeutic purposes.

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Year:  2006        PMID: 16196059     DOI: 10.1002/bit.20718

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  3 in total

1.  Defining features and exploring chemical modifications to manipulate RNAa activity.

Authors:  Robert F Place; Emily J Noonan; Zeno Földes-Papp; Long-Cheng Li
Journal:  Curr Pharm Biotechnol       Date:  2010-08       Impact factor: 2.837

2.  Intracellular stability of 2'-OMe-4'-thioribonucleoside modified siRNA leads to long-term RNAi effect.

Authors:  Mayumi Takahashi; Chisato Nagai; Hiroto Hatakeyama; Noriaki Minakawa; Hideyoshi Harashima; Akira Matsuda
Journal:  Nucleic Acids Res       Date:  2012-03-12       Impact factor: 16.971

Review 3.  Maintaining the silence: reflections on long-term RNAi.

Authors:  Koen Raemdonck; Roosmarijn E Vandenbroucke; Joseph Demeester; Niek N Sanders; Stefaan C De Smedt
Journal:  Drug Discov Today       Date:  2008-08-07       Impact factor: 7.851

  3 in total

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