Literature DB >> 16195463

Rev1 employs a novel mechanism of DNA synthesis using a protein template.

Deepak T Nair1, Robert E Johnson, Louise Prakash, Satya Prakash, Aneel K Aggarwal.   

Abstract

The Rev1 DNA polymerase is highly specialized for the incorporation of C opposite template G. We present here the crystal structure of yeast Rev1 bound to template G and incoming 2'-deoxycytidine 5'-triphosphate (dCTP), which reveals that the polymerase itself dictates the identity of the incoming nucleotide, as well as the identity of the templating base. Template G and incoming dCTP do not pair with each other. Instead, the template G is evicted from the DNA helix, and it makes optimal hydrogen bonds with a segment of Rev1. Also, unlike other DNA polymerases, incoming dCTP pairs with an arginine rather than the templating base, which ensures the incorporation of dCTP over other incoming nucleotides. This mechanism provides an elegant means for promoting proficient and error-free synthesis through N2-adducted guanines that obstruct replication.

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Year:  2005        PMID: 16195463     DOI: 10.1126/science.1116336

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  132 in total

1.  Cross-link structure affects replication-independent DNA interstrand cross-link repair in mammalian cells.

Authors:  Erica M Hlavin; Michael B Smeaton; Anne M Noronha; Christopher J Wilds; Paul S Miller
Journal:  Biochemistry       Date:  2010-05-11       Impact factor: 3.162

2.  Structural basis for error-free replication of oxidatively damaged DNA by yeast DNA polymerase η.

Authors:  Timothy D Silverstein; Rinku Jain; Robert E Johnson; Louise Prakash; Satya Prakash; Aneel K Aggarwal
Journal:  Structure       Date:  2010-11-10       Impact factor: 5.006

3.  The critical mutagenic translesion DNA polymerase Rev1 is highly expressed during G(2)/M phase rather than S phase.

Authors:  Lauren S Waters; Graham C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-02       Impact factor: 11.205

Review 4.  DNA replication to aid somatic hypermutation.

Authors:  Zhenming Xu; Hong Zan; Zsuzsanna Pal; Paolo Casali
Journal:  Adv Exp Med Biol       Date:  2007       Impact factor: 2.622

5.  Complex formation of yeast Rev1 with DNA polymerase eta.

Authors:  Narottam Acharya; Lajos Haracska; Satya Prakash; Louise Prakash
Journal:  Mol Cell Biol       Date:  2007-09-17       Impact factor: 4.272

6.  DNA polymerase ζ as a potential biomarker of chemoradiation resistance and poor prognosis for cervical cancer.

Authors:  Ting-Yan Shi; Li Yang; Gong Yang; Xiao-Yu Tu; Xiaohua Wu; Xi Cheng; Qingyi Wei
Journal:  Med Oncol       Date:  2013-03-02       Impact factor: 3.064

7.  A polar filter in DNA polymerases prevents ribonucleotide incorporation.

Authors:  Mary K Johnson; Jithesh Kottur; Deepak T Nair
Journal:  Nucleic Acids Res       Date:  2019-11-18       Impact factor: 16.971

8.  Conformational changes during nucleotide selection by Sulfolobus solfataricus DNA polymerase Dpo4.

Authors:  Robert L Eoff; Raymundo Sanchez-Ponce; F Peter Guengerich
Journal:  J Biol Chem       Date:  2009-06-10       Impact factor: 5.157

9.  Y-family polymerase conformation is a major determinant of fidelity and translesion specificity.

Authors:  Ryan C Wilson; Meghan A Jackson; Janice D Pata
Journal:  Structure       Date:  2012-12-13       Impact factor: 5.006

10.  Structure and functional analysis of the BRCT domain of translesion synthesis DNA polymerase Rev1.

Authors:  John M Pryor; Lokesh Gakhar; M Todd Washington
Journal:  Biochemistry       Date:  2012-12-20       Impact factor: 3.162

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