Literature DB >> 16188884

A mode of assembly of P0, P1, and P2 proteins at the GTPase-associated center in animal ribosome: in vitro analyses with P0 truncation mutants.

Akiko Hagiya1, Takao Naganuma, Yasushi Maki, Jun Ohta, Yukiko Tohkairin, Tomomi Shimizu, Takaomi Nomura, Akira Hachimori, Toshio Uchiumi.   

Abstract

Ribosomal P0, P1, and P2 proteins, together with the conserved domain of 28 S rRNA, constitute a major part of the GTPase-associated center in eukaryotic ribosomes. We investigated the mode of assembly in vitro by using various truncation mutants of silkworm P0. When compared with wild type (WT)-P0, the C-terminal truncation mutants CDelta65 and CDelta81 showed markedly reduced binding ability to P1 and P2, which was offset by the addition of an rRNA fragment covering the P0.P1-P2 binding site. The mutant CDelta107 lost the P1/P2 binding activity, whereas it retained the rRNA binding. In contrast, the N-terminal truncation mutants NDelta21-NDelta92 completely lost the rRNA binding, although they retained P1/P2 binding capability, implying an essential role of the N terminus of P0 for rRNA binding. The P0 mutants NDelta6, NDelta14, and CDelta18-CDelta81, together with P1/P2 and eL12, bound to the Escherichia coli core 50 S subunits deficient in L10.L7/L12 complex and L11. Analysis of incorporation of (32)P-labeled P1/P2 into the 50 S subunits with WT-P0 and CDelta81 by sedimentation analysis indicated that WT-P0 bound two copies of P1 and P2, but CDelta81 bound only one copy each. The hybrid ribosome with CDelta81 that appears to contain one P1-P2 heterodimer retained lower but considerable activities dependent on eukaryotic elongation factors. These results suggested that two P1-P2 dimers bind to close but separate regions on the C-terminal half of P0. The results were further confirmed by binding experiments using chimeric P0 mutants in which the C-terminal 81 or 107 amino acids were replaced with the homologous sequences of the archaebacterial P0.

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Year:  2005        PMID: 16188884     DOI: 10.1074/jbc.M506050200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  32 in total

1.  Archaeal ribosomal stalk protein interacts with translation factors in a nucleotide-independent manner via its conserved C terminus.

Authors:  Naoko Nomura; Takayoshi Honda; Kentaro Baba; Takao Naganuma; Takehito Tanzawa; Fumio Arisaka; Masanori Noda; Susumu Uchiyama; Isao Tanaka; Min Yao; Toshio Uchiumi
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-21       Impact factor: 11.205

2.  Pentameric organization of the ribosomal stalk accelerates recruitment of ricin a chain to the ribosome for depurination.

Authors:  Xiao-Ping Li; Przemyslaw Grela; Dawid Krokowski; Marek Tchórzewski; Nilgun E Tumer
Journal:  J Biol Chem       Date:  2010-10-25       Impact factor: 5.157

3.  KIF4 mediates anterograde translocation and positioning of ribosomal constituents to axons.

Authors:  Mariano Bisbal; José Wojnacki; Diego Peretti; Andrea Ropolo; Juliana Sesma; Ignacio Jausoro; Alfredo Cáceres
Journal:  J Biol Chem       Date:  2009-01-21       Impact factor: 5.157

4.  Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes.

Authors:  Takao Naganuma; Naoko Nomura; Min Yao; Masahiro Mochizuki; Toshio Uchiumi; Isao Tanaka
Journal:  J Biol Chem       Date:  2009-12-10       Impact factor: 5.157

5.  Multiplication of Ribosomal P-Stalk Proteins Contributes to the Fidelity of Translation.

Authors:  Leszek Wawiórka; Eliza Molestak; Monika Szajwaj; Barbara Michalec-Wawiórka; Mateusz Mołoń; Lidia Borkiewicz; Przemysław Grela; Aleksandra Boguszewska; Marek Tchórzewski
Journal:  Mol Cell Biol       Date:  2017-08-11       Impact factor: 4.272

6.  Evolution of the protein stoichiometry in the L12 stalk of bacterial and organellar ribosomes.

Authors:  Iakov I Davydov; Ingo Wohlgemuth; Irena I Artamonova; Henning Urlaub; Alexander G Tonevitsky; Marina V Rodnina
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

7.  Characterization of anti-P monoclonal antibodies directed against the ribosomal protein-RNA complex antigen and produced using Murphy Roths large autoimmune-prone mice.

Authors:  H Sato; M Onozuka; A Hagiya; S Hoshino; I Narita; T Uchiumi
Journal:  Clin Exp Immunol       Date:  2015-02       Impact factor: 4.330

8.  Erythrocytic stage-dependent regulation of oligomerization of Plasmodium ribosomal protein P2.

Authors:  Sudipta Das; Rajagopal Sudarsan; Subramanian Sivakami; Shobhona Sharma
Journal:  J Biol Chem       Date:  2012-10-11       Impact factor: 5.157

9.  Solution structure of the dimerization domain of ribosomal protein P2 provides insights for the structural organization of eukaryotic stalk.

Authors:  Ka-Ming Lee; Conny Wing-Heng Yu; Denise So-Bik Chan; Teddy Yu-Hin Chiu; Guang Zhu; Kong-Hung Sze; Pang-Chui Shaw; Kam-Bo Wong
Journal:  Nucleic Acids Res       Date:  2010-04-12       Impact factor: 16.971

10.  Functional divergence between the two P1-P2 stalk dimers on the ribosome in their interaction with ricin A chain.

Authors:  Przemysław Grela; Xiao-Ping Li; Marek Tchórzewski; Nilgun E Tumer
Journal:  Biochem J       Date:  2014-05-15       Impact factor: 3.857

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