Literature DB >> 16188310

Phosphagen kinase of the giant tubeworm Riftia pachyptila. Cloning and expression of cytoplasmic and mitochondrial isoforms of taurocyamine kinase.

Kouji Uda1, Kumiko Tanaka, Xavier Bailly, Franck Zal, Tomohiko Suzuki.   

Abstract

The giant tubeworm Riftia pachyptila lives at deep-sea hydrothermal vents along the East Pacific Rise and the Galapagos Rift. The large size and high growth rate of R. pachyptila is supported by an endosymbiotic relationship with a chemosynthetic bacterium. Elucidation of the regulation of energy metabolism of the giant tubeworm remains an interesting problem. The purpose of this study is to determine the cDNA sequence of phosphagen kinase, one of the most important enzymes in energy metabolism, and to characterize its function. Two phosphagen kinase cDNA sequences amplified from the cDNA library of R. pachyptila showed high derived amino acid sequence identity (74%) with those of cytoplasmic taurocyamine kinase (TK) and mitochondrial TK from an annelid Arenicola brasiliensis. The cytoplasmic form of the Riftia recombinant enzyme showed stronger activity for the substrates taurocyamine and also considerable activity for lombricine (21% that of taurocyamine). The mitochondrial form, which was structurally similar to mitochondrial creatine kinase, showed stronger activity for taurocyamine, and a broader activity for various guanidine compounds: glycocyamine (35% that of taurocyamine), lombricine (31%) and arginine (3%). Both forms showed no activity for creatine. The difference in substrate specificities between the cytoplasmic and mitochondrial forms might be attributable to the large difference in the amino acid sequence of the GS region and/or several key amino acid residues for establishing guanidine substrate specificity. Based on these results, we conclude that Riftia contains at least two forms of TK as phosphagen kinase. We also report the kinetic parameters, Km and kcat, of Arenicola and Riftia TKs for the first time. The Km values for taurocyamine of Arenicola and Riftia TKs ranged from 0.9 to 4.0 mM and appear to be comparable to those of other annelid-specific enzymes, lombricine kinase and glycocyamine kinase, but are significantly lower than those of Neanthes cytoplasmic and mitochondrial creatine kinases. Comparison of kcat/Km value in various annelid phosphagen kinases indicates that Arenicola mitochondrial TK has the highest catalytic efficiency (16.2 s-1 mM-1). In Arenicola TKs, the mitochondrial form has seven-fold higher efficiency than the cytoplasmic form.

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Year:  2005        PMID: 16188310     DOI: 10.1016/j.ijbiomac.2005.08.009

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  7 in total

1.  Evolution of the cytoplasmic and mitochondrial phosphagen kinases unique to annelid groups.

Authors:  Kumiko Tanaka; Kouji Uda; Mayumi Shimada; Ken-Ichi Takahashi; Shinobu Gamou; W Ross Ellington; Tomohiko Suzuki
Journal:  J Mol Evol       Date:  2007-10-12       Impact factor: 2.395

2.  Cold-adapted features of arginine kinase from the deep-sea clam Calyptogena kaikoi.

Authors:  Tomohiko Suzuki; Kentaro Yamamoto; Hiroshi Tada; Kouji Uda
Journal:  Mar Biotechnol (NY)       Date:  2011-10-21       Impact factor: 3.619

3.  Crystallization and X-ray analysis of the Schistosoma mansoni guanidino kinase.

Authors:  Ayman M Awama; Patricia Paracuellos; Sabine Laurent; Colette Dissous; Olivier Marcillat; Patrice Gouet
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-08-20

4.  Linking hydrothermal geochemistry to organismal physiology: physiological versatility in Riftia pachyptila from sedimented and basalt-hosted vents.

Authors:  Julie C Robidart; Annelys Roque; Pengfei Song; Peter R Girguis
Journal:  PLoS One       Date:  2011-07-14       Impact factor: 3.240

5.  Novel Insights on Obligate Symbiont Lifestyle and Adaptation to Chemosynthetic Environment as Revealed by the Giant Tubeworm Genome.

Authors:  André Luiz de Oliveira; Jessica Mitchell; Peter Girguis; Monika Bright
Journal:  Mol Biol Evol       Date:  2022-01-07       Impact factor: 16.240

6.  Molecular cloning and characterization of taurocyamine kinase from Clonorchis sinensis: a candidate chemotherapeutic target.

Authors:  Jing-Ying Xiao; Ji-Yun Lee; Shinji Tokuhiro; Mitsuru Nagataki; Blanca R Jarilla; Haruka Nomura; Tae Im Kim; Sung-Jong Hong; Takeshi Agatsuma
Journal:  PLoS Negl Trop Dis       Date:  2013-11-21

7.  Insight into Structural Aspects of Histidine 284 of Daphnia magna Arginine Kinase.

Authors:  Zhili Rao; So Young Kim; Xiaotong Li; Da Som Kim; Yong Ju Kim; Jung Hee Park
Journal:  Mol Cells       Date:  2020-09-30       Impact factor: 5.034

  7 in total

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