Literature DB >> 16187154

Genetic diversity on 16S rDNA sequence and phylogenic tree analysis in Pasteurella pneumotropica strains isolated from laboratory animals.

Nobuhito Hayashimoto1, Akira Takakura, Toshio Itoh.   

Abstract

To reveal the genetic diversity of Pasteurella pneumotropica, the 16S rDNA sequence and multiple alignments were performed for 35 strains (from 17 mice, 13 rats, 3 hamsters, 1 rabbit, and 1 guinea pig) identified as P. pneumotropica using a commercial biochemical test kit or PCR test and two reference strains (ATCC 35149 and CNP160). Each strain showed a close similarity with one of the following organisms: P. pneumotropica (M75083), Bisgaard taxon22 (AY172726), Pasteurella sp. MCCM00235 (AF224300), Pasteurellaceae gen. sp. Forsyth A3 (AF224301), and Actinobacillus muris (AF024526) on GenBank, and were divided into six clusters on a phylogenic tree. Two reference strains, P. pneumotropica biotype Jawetz and Heyl, were classified at both ends of the clusters. Our conclusion is that P. pneumotropica should be reclassified because of the very wide genetic diversity that exists.

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Year:  2005        PMID： 16187154     DOI： 10.1007/s00284-005-4541-6

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN： 0343-8651            Impact factor:   2.188


  14 in total

1.  Identification by 16S rDNA fragment amplification and determination of genetic diversity by random amplified polymorphic DNA analysis of Pasteurella pneumotropica isolated from laboratory rodents.

Authors:  A Kodjo; L Villard; F Veillet; F Escande; E Borges; F Maurin; J Bonnod; Y Richard
Journal:  Lab Anim Sci       Date:  1999-02

2.  Treatment of Pasteurella pneumotropica abscesses in nude mice (nu/nu).

Authors:  G J Moore; P Aldred
Journal:  Lab Anim       Date:  1978-10       Impact factor: 2.471

3.  Outbreak of Pasteurella pneumotropica in a closed colony of STOCK-Cd28(tm1Mak) mice.

Authors:  J E Artwohl; J C Flynn; R M Bunte; O Angen; K C Herold
Journal:  Contemp Top Lab Anim Sci       Date:  2000-01

4.  Evaluation of PCR as a means of identification of Pasteurella pneumotropica.

Authors:  R Nozu; K Goto; H Ohashi; A Takakura; T Itoh
Journal:  Exp Anim       Date:  1999-01

5.  Detection of Bacillus piliformis by specific amplification of ribosomal sequences.

Authors:  K Goto; T Itoh
Journal:  Jikken Dobutsu       Date:  1994-07

6.  Toll-like receptor 4-positive macrophages protect mice from Pasteurella pneumotropica-induced pneumonia.

Authors:  Marcia L Hart; Derek A Mosier; Stephen K Chapes
Journal:  Infect Immun       Date:  2003-02       Impact factor: 3.441

7.  [The genetic classification of the Pasteurella pneumotropica complex].

Authors:  M Ryll; R Mutters; W Mannheim
Journal:  Berl Munch Tierarztl Wochenschr       Date:  1991-07-01       Impact factor: 0.328

8.  Role of Toll-like receptor 4 in gram-positive and gram-negative pneumonia in mice.

Authors:  Judith Branger; Sylvia Knapp; Sebastiaan Weijer; Jaklien C Leemans; Jennie M Pater; Peter Speelman; Sandrine Florquin; Tom van der Poll
Journal:  Infect Immun       Date:  2004-02       Impact factor: 3.441

9.  Efficacy of various therapeutic regimens in eliminating Pasteurella pneumotropica from the mouse.

Authors:  M F Goelz; J E Thigpen; J Mahler; W P Rogers; J Locklear; B J Weigler; D B Forsythe
Journal:  Lab Anim Sci       Date:  1996-06

10.  Reclassification of 30 Pasteurellaceae strains isolated from rodents.

Authors:  R Boot; M Bisgaard
Journal:  Lab Anim       Date:  1995-07       Impact factor: 2.471
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  6 in total

1.  Assessment of rpoB and 16S rRNA genes as targets for PCR-based identification of Pasteurella pneumotropica.

Authors:  Vandana S Dole; Laila A Banu; Richard D Fister; Werner Nicklas; Kenneths S Henderson
Journal:  Comp Med       Date:  2010-12       Impact factor: 0.982

2.  Biochemical characterization and phylogenetic analysis based on 16S rRNA sequences for V-factor dependent members of Pasteurellaceae derived from laboratory rats.

Authors:  Nobuhito Hayashimoto; Masami Ueno; Akira Tkakura; Toshio Itoh
Journal:  Curr Microbiol       Date:  2007-05-08       Impact factor: 2.188

3.  Characterization of Biofilm Formation in [Pasteurella] pneumotropica and [Actinobacillus] muris Isolates of Mouse Origin.

Authors:  Martin Sager; W Peter M Benten; Eva Engelhardt; Christina Gougoula; Laurentiu Benga
Journal:  PLoS One       Date:  2015-10-02       Impact factor: 3.240

4.  Sequestration of CO2 by halotolerant algae.

Authors:  Udhaya Ramkrishnan; Benedict Bruno; Sandhya Swaminathan
Journal:  J Environ Health Sci Eng       Date:  2014-05-06

5.  Sensitive and immunogen-specific serological detection of Rodentibacter pneumotropicus infections in mice.

Authors:  Felix Fingas; Daniela Volke; Rayk Hassert; Juliane Fornefett; Sophie Funk; Christoph Georg Baums; Ralf Hoffmann
Journal:  BMC Microbiol       Date:  2019-02-18       Impact factor: 3.605

6.  Identification and molecular characterization of a psychrophilic GH1 β-glucosidase from the subtropical soil microorganism Exiguobacterium sp. GXG2.

Authors:  Bangqiao Yin; Hengsen Gu; Xueyan Mo; Yue Xu; Bing Yan; Quanwen Li; Qian Ou; Bo Wu; Chen Guo; Chengjian Jiang
Journal:  AMB Express       Date:  2019-10-01       Impact factor: 3.298
  6 in total

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