Literature DB >> 16185819

DING proteins are from Pseudomonas.

Alan P Lewis1, Daniel Crowther.   

Abstract

DING proteins have been described as animal and plant proteins with potential biomineralisation, receptor or signalling roles that have been characterised by an N-terminal DINGGG-sequence. However, these sequences have only ever been identified as either N-terminal peptides or partial cDNA sequences, and have yet to be detected in any of the many genomic animal and plant genomes now available. Microbial relatives of the DING proteins have been described, which appear to be periplasmic phosphate-binding proteins. Recently, full-length Pseudomonas aeruginosa UCBPP-PA14 and Hypericum perforatum genes have been sequenced that show high homology to the published DING protein N-terminal sequences, and small peptides previously identified in conjunction with the peptide sequencing of DING proteins can also be mapped to regions across these full-length sequences. Searching with these sequences identifies other plant and animal cDNA fragments in the public nucleotide databases, and, additionally, an unordered rat genomic contig that contains a DING-like sequence on a small fragment. Analysing the codon usage of these DNA sequences identifies all of these sequences as of Pseudomonas origin, suggesting that DING proteins do not exist in eukaryotes, but instead are potentially due to microbial contamination or infection.

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Year:  2005        PMID: 16185819     DOI: 10.1016/j.femsle.2005.08.047

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  9 in total

1.  Cellular resistance to HIV-1 infection in target cells coincides with a rapid induction of X-DING-CD4 mRNA: indication of the unique host innate response to virus regulated through function of the X-DING-CD4 gene.

Authors:  Rasheda Y Shilpi; Rakhee Sachdeva; Malgorzata Simm
Journal:  Innate Immun       Date:  2011-10-31       Impact factor: 2.680

Review 2.  For whom the bell tolls? DING proteins in health and disease.

Authors:  Anne Berna; François Bernier; Eric Chabrière; Mikael Elias; Ken Scott; Andrew Suh
Journal:  Cell Mol Life Sci       Date:  2009-03-17       Impact factor: 9.261

3.  Evidence for phosphatase activity of p27SJ and its impact on the cell cycle.

Authors:  Nune Darbinian; Marta Czernik; Armine Darbinyan; Mikael Elias; Eric Chabriere; Surekha Bonasu; Kamel Khalili; Shohreh Amini
Journal:  J Cell Biochem       Date:  2009-06-01       Impact factor: 4.429

4.  p38SJ, a novel DINGG protein protects neuronal cells from alcohol induced injury and death.

Authors:  Shohreh Amini; Nana Merabova; Kamel Khalili; Nune Darbinian
Journal:  J Cell Physiol       Date:  2009-12       Impact factor: 6.384

5.  Creation of a bi-directional protein transduction system for suppression of HIV-1 expression by p27SJ.

Authors:  Nune Darbinian; Yuri Popov; Kamel Khalili; Shohreh Amini
Journal:  Antiviral Res       Date:  2007-12-26       Impact factor: 5.970

6.  Structural insights and ab initio sequencing within the DING proteins family.

Authors:  Mikael Elias; Dorothee Liebschner; Guillaume Gotthard; Eric Chabriere
Journal:  J Synchrotron Radiat       Date:  2010-11-05       Impact factor: 2.616

Review 7.  DING Proteins Extend to the Extremophilic World.

Authors:  Elena Porzio; Maria Rosaria Faraone Mennella; Giuseppe Manco
Journal:  Int J Mol Sci       Date:  2021-02-18       Impact factor: 5.923

8.  Eukaryotic DING proteins are endogenous: an immunohistological study in mouse tissues.

Authors:  Jean-Marc Collombet; Mikael Elias; Guillaume Gotthard; Elise Four; Frédérique Renault; Aurélie Joffre; Dominique Baubichon; Daniel Rochu; Eric Chabrière
Journal:  PLoS One       Date:  2010-02-08       Impact factor: 3.240

9.  Structure-function aspects of PstS in multi-drug-resistant Pseudomonas aeruginosa.

Authors:  Olga Zaborina; Christopher Holbrook; Yimei Chen; Jason Long; Alexander Zaborin; Irina Morozova; Hoylan Fernandez; Yingmin Wang; Jerrold R Turner; John C Alverdy
Journal:  PLoS Pathog       Date:  2008-02-08       Impact factor: 6.823

  9 in total

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