Literature DB >> 16184386

Translation initiation by non-AUG codons in Arabidopsis thaliana transgenic plants.

Annie Depeiges1, Fabienne Degroote, Marie Claude Espagnol, Georges Picard.   

Abstract

The efficiency of translation initiation at codons differing at one or two nucleotides from AUG was tested as initiation codons for the phosphinotricin-acetyltransferase gene in T-DNA plant transformation in Arabidopsis thaliana. With the exception of UUA codon that differs from AUG at two nucleotides and does not permit any detectable activity, all the other codons (AUC, GUG, ACG, and CUG) present a phosphinotrycin acetyltransferase activity that varies between 5 and 10% of the AUG activity. This low activity is sufficient to confer glufosinate resistance to some of the plants. These results indicate that, in plants as is the case in animals, non-AUG initiating codons may be used for translation initiation, namely when a low expression rate is needed.

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Year:  2005        PMID: 16184386     DOI: 10.1007/s00299-005-0034-0

Source DB:  PubMed          Journal:  Plant Cell Rep        ISSN: 0721-7714            Impact factor:   4.570


  35 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

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Journal:  Plant Cell       Date:  1990-01       Impact factor: 11.277

Review 3.  Context sequences of translation initiation codon in plants.

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Journal:  Plant Mol Biol       Date:  1997-12       Impact factor: 4.076

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Journal:  J Mol Biol       Date:  1989-01-20       Impact factor: 5.469

5.  Complete nucleotide sequences of the domestic cat (Felis catus) mitochondrial genome and a transposed mtDNA tandem repeat (Numt) in the nuclear genome.

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Journal:  Genomics       Date:  1996-04-15       Impact factor: 5.736

6.  Translation initiation from a naturally occurring non-AUG codon in Saccharomyces cerevisiae.

Authors:  Kuang-Jung Chang; Chien-Chia Wang
Journal:  J Biol Chem       Date:  2004-01-19       Impact factor: 5.157

7.  Initiation of translation by non-AUG codons in human T-cell lymphotropic virus type I mRNA encoding both Rex and Tax regulatory proteins.

Authors:  S Corcelette; T Massé; J J Madjar
Journal:  Nucleic Acids Res       Date:  2000-04-01       Impact factor: 16.971

Review 8.  Regulation and function of non-AUG-initiated proto-oncogenes.

Authors:  S R Hann
Journal:  Biochimie       Date:  1994       Impact factor: 4.079

9.  The immediate downstream codon strongly influences the efficiency of utilization of eukaryotic translation initiation codons.

Authors:  S Grünert; R J Jackson
Journal:  EMBO J       Date:  1994-08-01       Impact factor: 11.598

Review 10.  Viral strategies of translation initiation: ribosomal shunt and reinitiation.

Authors:  Lyubov A Ryabova; Mikhail M Pooggin; Thomas Hohn
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2002
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  10 in total

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Journal:  Plant Mol Biol       Date:  2011-03-15       Impact factor: 4.076

2.  Impact of the loss of AtMSH2 on double-strand break-induced recombination between highly diverged homeologous sequences in Arabidopsis thaliana germinal tissues.

Authors:  Jacqueline Lafleuriel; Fabienne Degroote; Annie Depeiges; Georges Picard
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3.  Isolation and characterization of a wheat IF2 homolog required for innate immunity to stripe rust.

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4.  Noncanonical translation initiation of the Arabidopsis flowering time and alternative polyadenylation regulator FCA.

Authors:  Gordon G Simpson; Rebecca E Laurie; Paul P Dijkwel; Victor Quesada; Peter A Stockwell; Caroline Dean; Richard C Macknight
Journal:  Plant Cell       Date:  2010-11-12       Impact factor: 11.277

5.  Evolution of plant phage-type RNA polymerases: the genome of the basal angiosperm Nuphar advena encodes two mitochondrial and one plastid phage-type RNA polymerases.

Authors:  Chang Yin; Uwe Richter; Thomas Börner; Andreas Weihe
Journal:  BMC Evol Biol       Date:  2010-12-06       Impact factor: 3.260

6.  Binding of more than one Tva800 molecule is required for ASLV-A entry.

Authors:  Eleanor R Gray; Christopher J R Illingworth; John M Coffin; Jonathan P Stoye
Journal:  Retrovirology       Date:  2011-11-18       Impact factor: 4.602

7.  Novel pipeline identifies new upstream ORFs and non-AUG initiating main ORFs with conserved amino acid sequences in the 5' leader of mRNAs in Arabidopsis thaliana.

Authors:  Sjors van der Horst; Berend Snel; Johannes Hanson; Sjef Smeekens
Journal:  RNA       Date:  2018-12-19       Impact factor: 4.942

Review 8.  Codon usage bias.

Authors:  Sujatha Thankeswaran Parvathy; Varatharajalu Udayasuriyan; Vijaipal Bhadana
Journal:  Mol Biol Rep       Date:  2021-11-25       Impact factor: 2.316

9.  Evaluating Plant Gene Models Using Machine Learning.

Authors:  Shriprabha R Upadhyaya; Philipp E Bayer; Cassandria G Tay Fernandez; Jakob Petereit; Jacqueline Batley; Mohammed Bennamoun; Farid Boussaid; David Edwards
Journal:  Plants (Basel)       Date:  2022-06-20

10.  RNA2-encoded VP37 protein of Broad bean wilt virus 1 is a determinant of pathogenicity, host susceptibility, and a suppressor of post-transcriptional gene silencing.

Authors:  Caterina Carpino; Inmaculada Ferriol Safont; Laura Elvira-González; Vicente Medina; Luis Rubio; Ezio Peri; Salvatore Davino; Luis Galipienso Torregrosa
Journal:  Mol Plant Pathol       Date:  2020-09-16       Impact factor: 5.663

  10 in total

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