Literature DB >> 16184228

Pre-mRNA trans-splicing: from kinetoplastids to mammals, an easy language for life diversity.

Mario Gustavo Mayer1, Lucile Maria Floeter-Winter.   

Abstract

Since the discovery that genes are split into intron and exons, the studies of the mechanisms involved in splicing pointed to presence of consensus signals in an attempt to generalize the process for all living cells. However, as discussed in the present review, splicing is a theme full of variations. The trans-splicing of pre-mRNAs, the joining of exons from distinct transcripts, is one of these variations with broad distribution in the phylogenetic tree. The biological meaning of this phenomenon is discussed encompassing reactions resembling a possible noise to mechanisms of gene expression regulation. All of them however, can contribute to the generation of life diversity.

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Year:  2005        PMID: 16184228     DOI: 10.1590/s0074-02762005000500010

Source DB:  PubMed          Journal:  Mem Inst Oswaldo Cruz        ISSN: 0074-0276            Impact factor:   2.743


  14 in total

1.  Spliced leader RNA trans-splicing in dinoflagellates.

Authors:  Huan Zhang; Yubo Hou; Lilibeth Miranda; David A Campbell; Nancy R Sturm; Terry Gaasterland; Senjie Lin
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-02       Impact factor: 11.205

2.  Short homologous sequences are strongly associated with the generation of chimeric RNAs in eukaryotes.

Authors:  Xin Li; Li Zhao; Huifeng Jiang; Wen Wang
Journal:  J Mol Evol       Date:  2008-12-17       Impact factor: 2.395

3.  Dinoflagellate spliced leader RNA genes display a variety of sequences and genomic arrangements.

Authors:  Huan Zhang; David A Campbell; Nancy R Sturm; Senjie Lin
Journal:  Mol Biol Evol       Date:  2009-04-22       Impact factor: 16.240

4.  Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs).

Authors:  Yijun Ruan; Hong Sain Ooi; Siew Woh Choo; Kuo Ping Chiu; Xiao Dong Zhao; K G Srinivasan; Fei Yao; Chiou Yu Choo; Jun Liu; Pramila Ariyaratne; Wilson G W Bin; Vladimir A Kuznetsov; Atif Shahab; Wing-Kin Sung; Guillaume Bourque; Nallasivam Palanisamy; Chia-Lin Wei
Journal:  Genome Res       Date:  2007-06       Impact factor: 9.043

5.  Escaping the cut by restriction enzymes through single-strand self-annealing of host-edited 12-bp and longer synthetic palindromes.

Authors:  Fernando Castro-Chavez
Journal:  DNA Cell Biol       Date:  2011-09-06       Impact factor: 3.311

6.  Aberrant transcription and post-transcriptional processing of hepatitis C virus non-structural genes in transgenic mice.

Authors:  Mayura M Desai; Batbayar Tumurbataar; Yueqing Zhang; Lee-Nien Lillian Chan; Jiaren Sun; Teh-Sheng Chan
Journal:  Transgenic Res       Date:  2011-02-24       Impact factor: 2.788

7.  Comparative transcriptomics in Leishmania braziliensis: disclosing differential gene expression of coding and putative noncoding RNAs across developmental stages.

Authors:  Patrícia De Cássia Ruy; Natália Melquie Monteiro-Teles; Rubens Daniel Miserani Magalhães; Felipe Freitas-Castro; Leandro Dias; Tania Paula Aquino Defina; Elton José Rosas De Vasconcelos; Peter J Myler; Angela Kaysel Cruz
Journal:  RNA Biol       Date:  2019-02-22       Impact factor: 4.652

8.  Functional pre- mRNA trans-splicing of coactivator CoAA and corepressor RBM4 during stem/progenitor cell differentiation.

Authors:  Yang S Brooks; Guanghu Wang; Zheqiong Yang; Kimberly K Smith; Erhard Bieberich; Lan Ko
Journal:  J Biol Chem       Date:  2009-05-05       Impact factor: 5.157

Review 9.  The distinct roles of zinc finger CCHC-type (ZCCHC) superfamily proteins in the regulation of RNA metabolism.

Authors:  Yishu Wang; Yu Yu; Yidan Pang; Haojun Yu; Wenqi Zhang; Xian Zhao; Jianxiu Yu
Journal:  RNA Biol       Date:  2021-05-04       Impact factor: 4.652

10.  Retrieval of missing spliced leader in dinoflagellates.

Authors:  Huan Zhang; Senjie Lin
Journal:  PLoS One       Date:  2009-01-05       Impact factor: 3.240

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