Literature DB >> 16177696

Space-time clusters with flexible shapes.

Vijay S Iyengar1.   

Abstract

INTRODUCTION: Detection of space-time clusters plays an important role in epidemiology and public health. Different approaches for detecting space-time clusters have been proposed and implemented. Many of these approaches are based on the spatial scan statistic formulation. One key aspect of these cluster detection methods is the choice of cluster shape.
OBJECTIVES: In this report, the effect of using flexible shapes for clusters is explored by discussing the issues that need to be considered and evaluated.
METHODS: The first issue is the flexibility of the shape and its ability to model the disease cluster being studied. Another subtle and related factor is that with a more flexible shape, clusters can appear more often by chance, which will be reflected in the p value obtained through Monte Carlo hypothesis testing. Choosing more complex cluster shapes can affect the computational requirements and also constrain the cluster detection approaches that could be applied.
RESULTS: The New Mexico brain cancer data set is used to illustrate the tradeoffs. The analysis of these data should not be construed as a comprehensive investigation from the public health perspective. The data set is used to illustrate and compare clusters with two different shapes, cylinder and square pyramid. The results indicate the insights that can be gained from these shapes, individually and collectively.
CONCLUSION: The domain expert should choose the cluster shape, being aware of the disease being modeled and the analysis goals. For example, a flexible shape like the square pyramid can model either growth or shrinkage and movement of the disease and might provide insights on its origin. In addition, performing the analyses with more than one shape can lead to increased insights regarding the disease cluster.

Entities:  

Mesh:

Year:  2005        PMID: 16177696

Source DB:  PubMed          Journal:  MMWR Suppl        ISSN: 2380-8942


  6 in total

1.  Voronoi distance based prospective space-time scans for point data sets: a dengue fever cluster analysis in a southeast Brazilian town.

Authors:  Luiz H Duczmal; Gladston Jp Moreira; Denise Burgarelli; Ricardo Hc Takahashi; Flávia Co Magalhães; Emerson C Bodevan
Journal:  Int J Health Geogr       Date:  2011-04-23       Impact factor: 3.918

2.  A spatial analysis of human Schistosoma japonicum infections in Hubei, China, during 2009-2014.

Authors:  Hong Zhu; Shun-Xiang Cai; Jian-Bing Liu; Zu-Wu Tu; Jing Xia; Xiao-Wei Shan; Juan Qiu; Yong Jiang; Ying Xiao; Li Tang; Xi-Bao Huang
Journal:  Parasit Vectors       Date:  2016-10-04       Impact factor: 3.876

3.  An Eigenspace approach for detecting multiple space-time disease clusters: Application to measles hotspots detection in Khyber-Pakhtunkhwa, Pakistan.

Authors:  Sami Ullah; Hanita Daud; Sarat C Dass; Hadi Fanaee-T; Alamgir Khalil
Journal:  PLoS One       Date:  2018-06-19       Impact factor: 3.240

4.  Spatiotemporal Analyses of 2 Co-Circulating SARS-CoV-2 Variants, New York State, USA.

Authors:  Alexis Russell; Collin O'Connor; Erica Lasek-Nesselquist; Jonathan Plitnick; John P Kelly; Daryl M Lamson; Kirsten St George
Journal:  Emerg Infect Dis       Date:  2022-02-08       Impact factor: 16.126

5.  Tuberculosis incidence in Portugal: spatiotemporal clustering.

Authors:  Carla Nunes
Journal:  Int J Health Geogr       Date:  2007-07-11       Impact factor: 3.918

6.  A flexibly shaped space-time scan statistic for disease outbreak detection and monitoring.

Authors:  Kunihiko Takahashi; Martin Kulldorff; Toshiro Tango; Katherine Yih
Journal:  Int J Health Geogr       Date:  2008-04-11       Impact factor: 3.918

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.